Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC28.67■■■□□ 2.18
PCDH11YQ9BZA8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC28.67■■■□□ 2.18
PCDH11YQ9BZA8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PCDH11YQ9BZA8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PCDH11YQ9BZA8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDH11YQ9BZA8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
PCDH11YQ9BZA8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDH11YQ9BZA8 AC005224.4-201ENST00000583262 1652 ntBASIC28.65■■■□□ 2.18
PCDH11YQ9BZA8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PCDH11YQ9BZA8 AL139125.2-201ENST00000623134 1869 ntBASIC28.65■■■□□ 2.18
PCDH11YQ9BZA8 KRT87P-202ENST00000534226 1464 ntBASIC28.65■■■□□ 2.18
PCDH11YQ9BZA8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PCDH11YQ9BZA8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.65■■■□□ 2.18
PCDH11YQ9BZA8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.64■■■□□ 2.18
PCDH11YQ9BZA8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
PCDH11YQ9BZA8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PCDH11YQ9BZA8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.64■■■□□ 2.18
PCDH11YQ9BZA8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
PCDH11YQ9BZA8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
PCDH11YQ9BZA8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC28.64■■■□□ 2.17
PCDH11YQ9BZA8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 GPX1P1-201ENST00000388829 606 ntBASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
PCDH11YQ9BZA8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 AC104187.1-201ENST00000607510 612 ntBASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 DUSP8P3-201ENST00000399571 1760 ntBASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
PCDH11YQ9BZA8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDH11YQ9BZA8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.6■■■□□ 2.17
PCDH11YQ9BZA8 AC009237.3-201ENST00000393279 1427 ntBASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 AL050303.2-201ENST00000619798 666 ntBASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
PCDH11YQ9BZA8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
PCDH11YQ9BZA8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.58■■■□□ 2.17
PCDH11YQ9BZA8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.58■■■□□ 2.17
PCDH11YQ9BZA8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
PCDH11YQ9BZA8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDH11YQ9BZA8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.16
PCDH11YQ9BZA8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.58■■■□□ 2.16
PCDH11YQ9BZA8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 ABCB10P4-201ENST00000566803 2184 ntBASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
PCDH11YQ9BZA8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 AC142086.2-201ENST00000569753 217 ntBASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.56■■■□□ 2.16
PCDH11YQ9BZA8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms