Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 DUX4L4-201ENST00000566884 1269 ntBASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 NTF6A-201ENST00000591175 560 ntBASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 AC244517.3-201ENST00000616254 1235 ntBASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
KRTAP3-1Q9BYR8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 Z98882.1-201ENST00000622160 2253 ntBASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 AL589935.2-201ENST00000616471 1231 ntBASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 FEM1AP4-201ENST00000443167 1987 ntBASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 AC004687.1-201ENST00000579003 1625 ntBASIC11.06□□□□□ -0.64
KRTAP3-1Q9BYR8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 AL157384.1-201ENST00000445995 2473 ntBASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 AC103834.1-201ENST00000520383 144 ntBASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 MIR4508-201ENST00000584178 70 ntBASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 AC009086.3-201ENST00000623486 1008 ntBASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
KRTAP3-1Q9BYR8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC11.04□□□□□ -0.64
KRTAP3-1Q9BYR8 ABHD17AP5-201ENST00000580133 923 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms