Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC060814.1-201ENST00000554326 538 ntBASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AL132640.1-201ENST00000559594 619 ntBASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC099518.2-201ENST00000565802 704 ntBASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC133552.4-201ENST00000576103 676 ntBASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 PRELID3BP3-201ENST00000584963 545 ntBASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AL365181.4-201ENST00000609800 547 ntBASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP4-4Q9BYR3 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 NOVA1-201ENST00000344429 896 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC007618.1-201ENST00000366455 732 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC240504.1-201ENST00000395709 845 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC019178.2-201ENST00000423595 505 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 MORF4L1P7-201ENST00000426038 703 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AL732372.2-201ENST00000431321 437 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 TMX3-202ENST00000443099 913 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 HNRNPA1P23-201ENST00000491091 1133 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 PRELID3BP6-201ENST00000503839 571 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC008417.1-201ENST00000510014 565 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC026616.1-201ENST00000523157 525 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 ADAM3B-201ENST00000569937 840 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC010653.1-201ENST00000571108 881 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC107982.3-201ENST00000584957 985 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AP001357.1-201ENST00000586304 1053 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 E2F3P1-201ENST00000589887 1230 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 ITGA9-AS1-211ENST00000594579 670 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC079598.2-201ENST00000599191 1294 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC079791.1-201ENST00000605356 973 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AP001330.5-201ENST00000607176 411 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AC100847.1-201ENST00000611316 481 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AL121845.4-201ENST00000613401 306 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 CU638689.5-201ENST00000623892 1032 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 MIR3974-201ENST00000637126 96 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 AP003399.1-201ENST00000637534 361 ntBASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
KRTAP4-4Q9BYR3 MTND4P16-201ENST00000466108 1367 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms