Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 AC068473.5-201ENST00000616428 2072 ntBASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSBP3Q9BWW4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 AC010141.3-201ENST00000456659 717 ntBASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 AL031602.1-201ENST00000633169 911 ntBASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SSBP3Q9BWW4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 AC105233.4-201ENST00000642045 216 ntBASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSBP3Q9BWW4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.14■□□□□ 0.5
SSBP3Q9BWW4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSBP3Q9BWW4 DUSP8P3-201ENST00000399571 1760 ntBASIC18.14■□□□□ 0.5
SSBP3Q9BWW4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
SSBP3Q9BWW4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSBP3Q9BWW4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
SSBP3Q9BWW4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSBP3Q9BWW4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 AC027612.3-201ENST00000413684 1047 ntBASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 YBX1P1-201ENST00000445822 960 ntBASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.14■□□□□ 0.49
SSBP3Q9BWW4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 MIR6084-201ENST00000622012 110 ntBASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SSBP3Q9BWW4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 AC087623.3-201ENST00000607047 1098 ntBASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.12■□□□□ 0.49
SSBP3Q9BWW4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSBP3Q9BWW4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSBP3Q9BWW4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.11■□□□□ 0.49
SSBP3Q9BWW4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSBP3Q9BWW4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms