Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SLC47A1Q96FL8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SLC47A1Q96FL8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC47A1Q96FL8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.52■□□□□ 0.87
SLC47A1Q96FL8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC47A1Q96FL8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 MIR6722-201ENST00000617286 78 ntBASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 LINC01960-201ENST00000563759 1884 ntBASIC20.5■□□□□ 0.87
SLC47A1Q96FL8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC47A1Q96FL8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 KRT125P-201ENST00000546827 989 ntBASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SLC47A1Q96FL8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 LINC01529-204ENST00000636474 1715 ntBASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 Z92544.1-202ENST00000571933 1220 ntBASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 AC005703.6-201ENST00000623265 1329 ntBASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC47A1Q96FL8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 RARRES2P1-201ENST00000474487 481 ntBASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC47A1Q96FL8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC47A1Q96FL8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms