Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC27.15■■□□□ 1.94
RPGRQ92834 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RPGRQ92834 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC27.15■■□□□ 1.94
RPGRQ92834 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.15■■□□□ 1.94
RPGRQ92834 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.15■■□□□ 1.94
RPGRQ92834 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RPGRQ92834 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.15■■□□□ 1.94
RPGRQ92834 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RPGRQ92834 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC27.14■■□□□ 1.94
RPGRQ92834 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.14■■□□□ 1.94
RPGRQ92834 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.14■■□□□ 1.94
RPGRQ92834 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RPGRQ92834 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RPGRQ92834 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RPGRQ92834 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RPGRQ92834 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RPGRQ92834 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RPGRQ92834 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.13■■□□□ 1.93
RPGRQ92834 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RPGRQ92834 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.12■■□□□ 1.93
RPGRQ92834 GPX1P1-201ENST00000388829 606 ntBASIC27.12■■□□□ 1.93
RPGRQ92834 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RPGRQ92834 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.12■■□□□ 1.93
RPGRQ92834 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RPGRQ92834 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
RPGRQ92834 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RPGRQ92834 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RPGRQ92834 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RPGRQ92834 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RPGRQ92834 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.11■■□□□ 1.93
RPGRQ92834 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RPGRQ92834 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RPGRQ92834 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RPGRQ92834 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RPGRQ92834 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.11■■□□□ 1.93
RPGRQ92834 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.1■■□□□ 1.93
RPGRQ92834 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.1■■□□□ 1.93
RPGRQ92834 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
RPGRQ92834 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RPGRQ92834 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.1■■□□□ 1.93
RPGRQ92834 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
RPGRQ92834 ABHD17AP1-201ENST00000358206 933 ntBASIC27.1■■□□□ 1.93
RPGRQ92834 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.1■■□□□ 1.93
RPGRQ92834 MFSD11-216ENST00000590393 1141 ntBASIC27.1■■□□□ 1.93
RPGRQ92834 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
RPGRQ92834 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RPGRQ92834 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
RPGRQ92834 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
RPGRQ92834 AC104187.1-201ENST00000607510 612 ntBASIC27.09■■□□□ 1.93
RPGRQ92834 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RPGRQ92834 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RPGRQ92834 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.09■■□□□ 1.93
RPGRQ92834 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
RPGRQ92834 AC005224.4-201ENST00000583262 1652 ntBASIC27.08■■□□□ 1.93
RPGRQ92834 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RPGRQ92834 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RPGRQ92834 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.08■■□□□ 1.93
RPGRQ92834 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.08■■□□□ 1.93
RPGRQ92834 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
RPGRQ92834 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.08■■□□□ 1.93
RPGRQ92834 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
RPGRQ92834 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RPGRQ92834 KRT87P-202ENST00000534226 1464 ntBASIC27.07■■□□□ 1.92
RPGRQ92834 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.07■■□□□ 1.92
RPGRQ92834 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RPGRQ92834 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RPGRQ92834 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RPGRQ92834 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RPGRQ92834 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RPGRQ92834 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.06■■□□□ 1.92
RPGRQ92834 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RPGRQ92834 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
RPGRQ92834 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RPGRQ92834 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RPGRQ92834 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RPGRQ92834 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.05■■□□□ 1.92
RPGRQ92834 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
RPGRQ92834 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.05■■□□□ 1.92
RPGRQ92834 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
RPGRQ92834 AC009237.3-201ENST00000393279 1427 ntBASIC27.05■■□□□ 1.92
RPGRQ92834 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.05■■□□□ 1.92
RPGRQ92834 ABCB10P4-201ENST00000566803 2184 ntBASIC27.05■■□□□ 1.92
RPGRQ92834 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.05■■□□□ 1.92
RPGRQ92834 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.04■■□□□ 1.92
RPGRQ92834 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
RPGRQ92834 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 AL139125.2-201ENST00000623134 1869 ntBASIC27.04■■□□□ 1.92
RPGRQ92834 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.04■■□□□ 1.92
RPGRQ92834 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.04■■□□□ 1.92
RPGRQ92834 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RPGRQ92834 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
RPGRQ92834 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC27.04■■□□□ 1.92
RPGRQ92834 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
RPGRQ92834 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms