Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX1Q92499 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX1Q92499 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.33■■□□□ 1.33
DDX1Q92499 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX1Q92499 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.33■■□□□ 1.33
DDX1Q92499 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.33■■□□□ 1.33
DDX1Q92499 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
DDX1Q92499 MIR6821-201ENST00000617625 74 ntBASIC23.33■■□□□ 1.33
DDX1Q92499 AL355001.2-201ENST00000620617 1191 ntBASIC23.33■■□□□ 1.33
DDX1Q92499 AL031602.1-201ENST00000633169 911 ntBASIC23.33■■□□□ 1.33
DDX1Q92499 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
DDX1Q92499 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX1Q92499 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX1Q92499 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
DDX1Q92499 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX1Q92499 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
DDX1Q92499 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
DDX1Q92499 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX1Q92499 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX1Q92499 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX1Q92499 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
DDX1Q92499 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX1Q92499 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX1Q92499 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
DDX1Q92499 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX1Q92499 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX1Q92499 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX1Q92499 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX1Q92499 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
DDX1Q92499 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX1Q92499 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX1Q92499 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX1Q92499 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX1Q92499 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX1Q92499 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX1Q92499 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
DDX1Q92499 SERBP1P1-201ENST00000396021 1160 ntBASIC23.31■■□□□ 1.32
DDX1Q92499 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX1Q92499 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
DDX1Q92499 AL031432.3-201ENST00000607698 485 ntBASIC23.31■■□□□ 1.32
DDX1Q92499 AC092171.4-201ENST00000609130 632 ntBASIC23.31■■□□□ 1.32
DDX1Q92499 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX1Q92499 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX1Q92499 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX1Q92499 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.31■■□□□ 1.32
DDX1Q92499 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
DDX1Q92499 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX1Q92499 LINC00565-201ENST00000562710 2331 ntBASIC23.3■■□□□ 1.32
DDX1Q92499 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX1Q92499 UNC93B3-201ENST00000308076 687 ntBASIC23.3■■□□□ 1.32
DDX1Q92499 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.3■■□□□ 1.32
DDX1Q92499 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX1Q92499 AL136162.1-201ENST00000607711 1078 ntBASIC23.3■■□□□ 1.32
DDX1Q92499 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX1Q92499 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
DDX1Q92499 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
DDX1Q92499 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX1Q92499 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX1Q92499 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
DDX1Q92499 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX1Q92499 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX1Q92499 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX1Q92499 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.29■■□□□ 1.32
DDX1Q92499 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX1Q92499 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
DDX1Q92499 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX1Q92499 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX1Q92499 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX1Q92499 AC092053.2-201ENST00000640557 1818 ntBASIC23.29■■□□□ 1.32
DDX1Q92499 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX1Q92499 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
DDX1Q92499 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX1Q92499 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DDX1Q92499 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
DDX1Q92499 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
DDX1Q92499 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX1Q92499 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX1Q92499 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
DDX1Q92499 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
DDX1Q92499 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
DDX1Q92499 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
DDX1Q92499 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX1Q92499 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 AC097381.1-201ENST00000429019 1296 ntBASIC23.27■■□□□ 1.32
DDX1Q92499 OR2I1P-207ENST00000453522 948 ntBASIC23.27■■□□□ 1.32
DDX1Q92499 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.27■■□□□ 1.32
DDX1Q92499 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.27■■□□□ 1.32
DDX1Q92499 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.27■■□□□ 1.32
DDX1Q92499 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms