Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
SMIM4Q8WVI0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SMIM4Q8WVI0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMIM4Q8WVI0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMIM4Q8WVI0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SMIM4Q8WVI0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMIM4Q8WVI0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SMIM4Q8WVI0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
SMIM4Q8WVI0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.64■□□□□ 0.58
SMIM4Q8WVI0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 LONRF2P2-201ENST00000439212 571 ntBASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM4Q8WVI0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 ABHD17AP4-201ENST00000411545 909 ntBASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 SPCS2P3-201ENST00000500401 656 ntBASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM4Q8WVI0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMIM4Q8WVI0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMIM4Q8WVI0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms