Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19■□□□□ 0.63
LINC01560Q8TB33 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19■□□□□ 0.63
LINC01560Q8TB33 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19■□□□□ 0.63
LINC01560Q8TB33 BID-214ENST00000617586 542 ntTSL 5 BASIC19■□□□□ 0.63
LINC01560Q8TB33 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19■□□□□ 0.63
LINC01560Q8TB33 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.99■□□□□ 0.63
LINC01560Q8TB33 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 RAP2CP1-201ENST00000605103 478 ntBASIC18.99■□□□□ 0.63
LINC01560Q8TB33 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC01560Q8TB33 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01560Q8TB33 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01560Q8TB33 AC026185.1-201ENST00000445748 174 ntBASIC18.98■□□□□ 0.63
LINC01560Q8TB33 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.98■□□□□ 0.63
LINC01560Q8TB33 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.98■□□□□ 0.63
LINC01560Q8TB33 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01560Q8TB33 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LINC01560Q8TB33 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC01560Q8TB33 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 AC079140.4-201ENST00000507448 529 ntBASIC18.97■□□□□ 0.63
LINC01560Q8TB33 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINC01560Q8TB33 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 ESRRAP2-201ENST00000418437 1549 ntBASIC18.96■□□□□ 0.63
LINC01560Q8TB33 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC01560Q8TB33 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.95■□□□□ 0.62
LINC01560Q8TB33 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.95■□□□□ 0.62
LINC01560Q8TB33 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 AC011767.1-201ENST00000617410 1153 ntBASIC18.94■□□□□ 0.62
LINC01560Q8TB33 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LINC01560Q8TB33 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 AC006970.2-201ENST00000450065 779 ntBASIC18.93■□□□□ 0.62
LINC01560Q8TB33 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.93■□□□□ 0.62
LINC01560Q8TB33 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms