Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC27.09■■□□□ 1.93
RTL9Q8NET4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RTL9Q8NET4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RTL9Q8NET4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RTL9Q8NET4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
RTL9Q8NET4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.08■■□□□ 1.92
RTL9Q8NET4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.08■■□□□ 1.92
RTL9Q8NET4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RTL9Q8NET4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
RTL9Q8NET4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.07■■□□□ 1.92
RTL9Q8NET4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.07■■□□□ 1.92
RTL9Q8NET4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.07■■□□□ 1.92
RTL9Q8NET4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
RTL9Q8NET4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.07■■□□□ 1.92
RTL9Q8NET4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.07■■□□□ 1.92
RTL9Q8NET4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RTL9Q8NET4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RTL9Q8NET4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTL9Q8NET4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.06■■□□□ 1.92
RTL9Q8NET4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.06■■□□□ 1.92
RTL9Q8NET4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC27.06■■□□□ 1.92
RTL9Q8NET4 RAP2CP1-201ENST00000605103 478 ntBASIC27.06■■□□□ 1.92
RTL9Q8NET4 AC004854.2-201ENST00000608450 1441 ntBASIC27.06■■□□□ 1.92
RTL9Q8NET4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
RTL9Q8NET4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RTL9Q8NET4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RTL9Q8NET4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTL9Q8NET4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.05■■□□□ 1.92
RTL9Q8NET4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
RTL9Q8NET4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.04■■□□□ 1.92
RTL9Q8NET4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTL9Q8NET4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTL9Q8NET4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
RTL9Q8NET4 COX20-201ENST00000366528 568 ntTSL 2 BASIC27.04■■□□□ 1.92
RTL9Q8NET4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
RTL9Q8NET4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.03■■□□□ 1.92
RTL9Q8NET4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTL9Q8NET4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTL9Q8NET4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTL9Q8NET4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.02■■□□□ 1.92
RTL9Q8NET4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTL9Q8NET4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTL9Q8NET4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTL9Q8NET4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
RTL9Q8NET4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTL9Q8NET4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTL9Q8NET4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
RTL9Q8NET4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.01■■□□□ 1.91
RTL9Q8NET4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTL9Q8NET4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTL9Q8NET4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.01■■□□□ 1.91
RTL9Q8NET4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTL9Q8NET4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27■■□□□ 1.91
RTL9Q8NET4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27■■□□□ 1.91
RTL9Q8NET4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27■■□□□ 1.91
RTL9Q8NET4 AC080038.1-201ENST00000611274 1154 ntBASIC27■■□□□ 1.91
RTL9Q8NET4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
RTL9Q8NET4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27■■□□□ 1.91
RTL9Q8NET4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTL9Q8NET4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
RTL9Q8NET4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.99■■□□□ 1.91
RTL9Q8NET4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.99■■□□□ 1.91
RTL9Q8NET4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RTL9Q8NET4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTL9Q8NET4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTL9Q8NET4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.99■■□□□ 1.91
RTL9Q8NET4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RTL9Q8NET4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RTL9Q8NET4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTL9Q8NET4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
RTL9Q8NET4 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.98■■□□□ 1.91
RTL9Q8NET4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.98■■□□□ 1.91
RTL9Q8NET4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.98■■□□□ 1.91
RTL9Q8NET4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.98■■□□□ 1.91
RTL9Q8NET4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RTL9Q8NET4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.97■■□□□ 1.91
RTL9Q8NET4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
RTL9Q8NET4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.97■■□□□ 1.91
RTL9Q8NET4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.97■■□□□ 1.91
RTL9Q8NET4 AC005224.4-201ENST00000583262 1652 ntBASIC26.97■■□□□ 1.91
RTL9Q8NET4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTL9Q8NET4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
RTL9Q8NET4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms