Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNF439Q8NDP4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF439Q8NDP4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF439Q8NDP4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNF439Q8NDP4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF439Q8NDP4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
ZNF439Q8NDP4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNF439Q8NDP4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ZNF439Q8NDP4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 AC242852.2-201ENST00000615738 1807 ntBASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 AC099791.2-201ENST00000605725 427 ntBASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 LINC01960-201ENST00000563759 1884 ntBASIC18.01■□□□□ 0.47
ZNF439Q8NDP4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18■□□□□ 0.47
ZNF439Q8NDP4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 SRR-208ENST00000576848 588 ntTSL 4 BASIC18■□□□□ 0.47
ZNF439Q8NDP4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18■□□□□ 0.47
ZNF439Q8NDP4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 LINC00526-201ENST00000581067 1875 ntBASIC18■□□□□ 0.47
ZNF439Q8NDP4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ZNF439Q8NDP4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
ZNF439Q8NDP4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 EP400NL-214ENST00000641289 2402 ntBASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 SRD5A1P1-201ENST00000442297 786 ntBASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ZNF439Q8NDP4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 pRNA.6-201ENST00000610482 90 ntBASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 pRNA.5-201ENST00000612139 90 ntBASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 pRNA.11-201ENST00000618423 90 ntBASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 pRNA.13-201ENST00000619112 90 ntBASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF439Q8NDP4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 AC139530.1-201ENST00000575312 1977 ntBASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF439Q8NDP4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms