Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 AC092803.2-201ENST00000564287 1899 ntBASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC168Q8NDH2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC168Q8NDH2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 AC013268.1-206ENST00000638368 961 ntBASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 AC112229.1-201ENST00000639295 961 ntBASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC168Q8NDH2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 AC073912.3-201ENST00000624414 853 ntBASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC168Q8NDH2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 AC010536.3-201ENST00000620306 533 ntBASIC18.43■□□□□ 0.54
CCDC168Q8NDH2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 AP001160.3-201ENST00000601484 763 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms