Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 DUSP8P3-201ENST00000399571 1760 ntBASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.3■■□□□ 1.64
PRPF38AQ8NAV1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PRPF38AQ8NAV1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRPF38AQ8NAV1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRPF38AQ8NAV1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PRPF38AQ8NAV1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC25.28■■□□□ 1.64
PRPF38AQ8NAV1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRPF38AQ8NAV1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PRPF38AQ8NAV1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.28■■□□□ 1.64
PRPF38AQ8NAV1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRPF38AQ8NAV1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
PRPF38AQ8NAV1 AC004911.1-201ENST00000416316 871 ntBASIC25.27■■□□□ 1.64
PRPF38AQ8NAV1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PRPF38AQ8NAV1 AC090192.1-201ENST00000517740 490 ntBASIC25.27■■□□□ 1.64
PRPF38AQ8NAV1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRPF38AQ8NAV1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
PRPF38AQ8NAV1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.26■■□□□ 1.63
PRPF38AQ8NAV1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PRPF38AQ8NAV1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PRPF38AQ8NAV1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.24■■□□□ 1.63
PRPF38AQ8NAV1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.24■■□□□ 1.63
PRPF38AQ8NAV1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PRPF38AQ8NAV1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.24■■□□□ 1.63
PRPF38AQ8NAV1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.24■■□□□ 1.63
PRPF38AQ8NAV1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.24■■□□□ 1.63
PRPF38AQ8NAV1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 KRT18P61-201ENST00000585825 1298 ntBASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.23■■□□□ 1.63
PRPF38AQ8NAV1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.22■■□□□ 1.63
PRPF38AQ8NAV1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRPF38AQ8NAV1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms