Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 AP004607.4-201ENST00000530158 1459 ntBASIC20.56■□□□□ 0.88
EXD3Q8N9H8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.56■□□□□ 0.88
EXD3Q8N9H8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EXD3Q8N9H8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 AC133561.1-201ENST00000568600 2415 ntBASIC20.55■□□□□ 0.88
EXD3Q8N9H8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 OR2I1P-207ENST00000453522 948 ntBASIC20.55■□□□□ 0.88
EXD3Q8N9H8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 AC012676.1-201ENST00000574705 1949 ntBASIC20.55■□□□□ 0.88
EXD3Q8N9H8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EXD3Q8N9H8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 AL499627.2-201ENST00000606283 725 ntBASIC20.54■□□□□ 0.88
EXD3Q8N9H8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
EXD3Q8N9H8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EXD3Q8N9H8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.53■□□□□ 0.88
EXD3Q8N9H8 AC004854.2-201ENST00000608450 1441 ntBASIC20.53■□□□□ 0.88
EXD3Q8N9H8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
EXD3Q8N9H8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.53■□□□□ 0.88
EXD3Q8N9H8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.53■□□□□ 0.88
EXD3Q8N9H8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.53■□□□□ 0.88
EXD3Q8N9H8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
EXD3Q8N9H8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 GPX1P1-201ENST00000388829 606 ntBASIC20.52■□□□□ 0.88
EXD3Q8N9H8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EXD3Q8N9H8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.52■□□□□ 0.87
EXD3Q8N9H8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 TPRG1LP1-201ENST00000598702 760 ntBASIC20.51■□□□□ 0.87
EXD3Q8N9H8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 AL161729.1-201ENST00000604104 1402 ntBASIC20.51■□□□□ 0.87
EXD3Q8N9H8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.51■□□□□ 0.87
EXD3Q8N9H8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 MIR663A-201ENST00000385250 93 ntBASIC20.5■□□□□ 0.87
EXD3Q8N9H8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
EXD3Q8N9H8 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.5■□□□□ 0.87
EXD3Q8N9H8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms