Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
LRTM2Q8N967 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRTM2Q8N967 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.83■□□□□ 0.45
LRTM2Q8N967 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM2Q8N967 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM2Q8N967 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.83■□□□□ 0.45
LRTM2Q8N967 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM2Q8N967 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM2Q8N967 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM2Q8N967 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRTM2Q8N967 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM2Q8N967 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM2Q8N967 LINC01521-201ENST00000504184 1943 ntBASIC17.83■□□□□ 0.44
LRTM2Q8N967 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM2Q8N967 DUX4L4-201ENST00000566884 1269 ntBASIC17.83■□□□□ 0.44
LRTM2Q8N967 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.83■□□□□ 0.44
LRTM2Q8N967 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.83■□□□□ 0.44
LRTM2Q8N967 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM2Q8N967 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LRTM2Q8N967 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM2Q8N967 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.83■□□□□ 0.44
LRTM2Q8N967 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRTM2Q8N967 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRTM2Q8N967 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LRTM2Q8N967 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRTM2Q8N967 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 AL121603.2-201ENST00000557373 2117 ntBASIC17.81■□□□□ 0.44
LRTM2Q8N967 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.81■□□□□ 0.44
LRTM2Q8N967 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.81■□□□□ 0.44
LRTM2Q8N967 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.81■□□□□ 0.44
LRTM2Q8N967 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRTM2Q8N967 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRTM2Q8N967 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
LRTM2Q8N967 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 AC139795.1-202ENST00000500444 432 ntBASIC17.8■□□□□ 0.44
LRTM2Q8N967 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 SNX5-217ENST00000606557 1087 ntBASIC17.8■□□□□ 0.44
LRTM2Q8N967 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRTM2Q8N967 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRTM2Q8N967 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM2Q8N967 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
LRTM2Q8N967 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM2Q8N967 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM2Q8N967 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 U85056.1-201ENST00000616429 682 ntBASIC17.79■□□□□ 0.44
LRTM2Q8N967 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM2Q8N967 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.79■□□□□ 0.44
LRTM2Q8N967 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRTM2Q8N967 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.79■□□□□ 0.44
LRTM2Q8N967 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
LRTM2Q8N967 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LRTM2Q8N967 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
LRTM2Q8N967 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.78■□□□□ 0.44
LRTM2Q8N967 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRTM2Q8N967 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM2Q8N967 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.77■□□□□ 0.44
LRTM2Q8N967 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRTM2Q8N967 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms