Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MIR935-201ENST00000401179 91 ntBASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 AC087239.1-201ENST00000622671 572 ntBASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.68■□□□□ 0.9
ARHGEF39Q8N4T4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 SMUG1P1-201ENST00000590640 811 ntBASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 AL354811.1-201ENST00000610286 706 ntBASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
ARHGEF39Q8N4T4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 AC027612.3-201ENST00000413684 1047 ntBASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 RARRES2P6-201ENST00000567333 442 ntBASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 AC105233.4-201ENST00000642045 216 ntBASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ARHGEF39Q8N4T4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 C1orf229-201ENST00000623686 2258 ntBASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ARHGEF39Q8N4T4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ARHGEF39Q8N4T4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 AC097381.1-201ENST00000429019 1296 ntBASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 MIR6821-201ENST00000617625 74 ntBASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 MIR6084-201ENST00000622012 110 ntBASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 AC137767.1-201ENST00000602918 1920 ntBASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ARHGEF39Q8N4T4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 AC079089.2-201ENST00000531211 1277 ntBASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ARHGEF39Q8N4T4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.62■□□□□ 0.89
ARHGEF39Q8N4T4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms