Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.26■■□□□ 1.96
DDX60Q8IY21 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.26■■□□□ 1.96
DDX60Q8IY21 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.96
DDX60Q8IY21 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
DDX60Q8IY21 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX60Q8IY21 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.26■■□□□ 1.95
DDX60Q8IY21 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.26■■□□□ 1.95
DDX60Q8IY21 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX60Q8IY21 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
DDX60Q8IY21 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.25■■□□□ 1.95
DDX60Q8IY21 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
DDX60Q8IY21 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.25■■□□□ 1.95
DDX60Q8IY21 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
DDX60Q8IY21 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
DDX60Q8IY21 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.24■■□□□ 1.95
DDX60Q8IY21 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX60Q8IY21 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX60Q8IY21 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX60Q8IY21 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
DDX60Q8IY21 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX60Q8IY21 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
DDX60Q8IY21 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
DDX60Q8IY21 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX60Q8IY21 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
DDX60Q8IY21 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DDX60Q8IY21 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DDX60Q8IY21 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.23■■□□□ 1.95
DDX60Q8IY21 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.23■■□□□ 1.95
DDX60Q8IY21 AC005224.4-201ENST00000583262 1652 ntBASIC27.23■■□□□ 1.95
DDX60Q8IY21 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.23■■□□□ 1.95
DDX60Q8IY21 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.23■■□□□ 1.95
DDX60Q8IY21 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
DDX60Q8IY21 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX60Q8IY21 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.22■■□□□ 1.95
DDX60Q8IY21 ANOS2P-203ENST00000472227 1816 ntBASIC27.22■■□□□ 1.95
DDX60Q8IY21 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX60Q8IY21 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
DDX60Q8IY21 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.22■■□□□ 1.95
DDX60Q8IY21 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
DDX60Q8IY21 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
DDX60Q8IY21 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX60Q8IY21 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX60Q8IY21 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
DDX60Q8IY21 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX60Q8IY21 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.21■■□□□ 1.95
DDX60Q8IY21 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
DDX60Q8IY21 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX60Q8IY21 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.21■■□□□ 1.95
DDX60Q8IY21 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
DDX60Q8IY21 HLA-L-209ENST00000420110 1011 ntBASIC27.21■■□□□ 1.95
DDX60Q8IY21 CDCA4P2-201ENST00000441182 718 ntBASIC27.21■■□□□ 1.95
DDX60Q8IY21 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.21■■□□□ 1.95
DDX60Q8IY21 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.21■■□□□ 1.95
DDX60Q8IY21 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
DDX60Q8IY21 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
DDX60Q8IY21 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX60Q8IY21 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.2■■□□□ 1.94
DDX60Q8IY21 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX60Q8IY21 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DDX60Q8IY21 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.19■■□□□ 1.94
DDX60Q8IY21 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX60Q8IY21 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC27.19■■□□□ 1.94
DDX60Q8IY21 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC27.19■■□□□ 1.94
DDX60Q8IY21 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX60Q8IY21 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.19■■□□□ 1.94
DDX60Q8IY21 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.19■■□□□ 1.94
DDX60Q8IY21 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX60Q8IY21 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX60Q8IY21 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
DDX60Q8IY21 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.19■■□□□ 1.94
DDX60Q8IY21 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
DDX60Q8IY21 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
DDX60Q8IY21 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
DDX60Q8IY21 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX60Q8IY21 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX60Q8IY21 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX60Q8IY21 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
DDX60Q8IY21 MIR663A-201ENST00000385250 93 ntBASIC27.18■■□□□ 1.94
DDX60Q8IY21 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.18■■□□□ 1.94
DDX60Q8IY21 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.18■■□□□ 1.94
DDX60Q8IY21 LINC01960-201ENST00000563759 1884 ntBASIC27.18■■□□□ 1.94
DDX60Q8IY21 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.17■■□□□ 1.94
DDX60Q8IY21 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DDX60Q8IY21 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
DDX60Q8IY21 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
DDX60Q8IY21 KRT19P1-201ENST00000405746 1186 ntBASIC27.17■■□□□ 1.94
DDX60Q8IY21 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
DDX60Q8IY21 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.17■■□□□ 1.94
DDX60Q8IY21 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC27.17■■□□□ 1.94
DDX60Q8IY21 GAS2L1P2-201ENST00000436355 1356 ntBASIC27.17■■□□□ 1.94
DDX60Q8IY21 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
DDX60Q8IY21 KRT87P-202ENST00000534226 1464 ntBASIC27.17■■□□□ 1.94
DDX60Q8IY21 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.16■■□□□ 1.94
DDX60Q8IY21 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.16■■□□□ 1.94
DDX60Q8IY21 AC080038.1-201ENST00000611274 1154 ntBASIC27.16■■□□□ 1.94
DDX60Q8IY21 ASL-203ENST00000380839 1765 ntTSL 5 BASIC27.16■■□□□ 1.94
DDX60Q8IY21 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX60Q8IY21 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX60Q8IY21 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX60Q8IY21 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms