Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 LINC01529-204ENST00000636474 1715 ntBASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 LINC01960-201ENST00000563759 1884 ntBASIC21.69■■□□□ 1.06
TRIM42Q8IWZ5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 FP325331.1-202ENST00000623531 1380 ntBASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM42Q8IWZ5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM42Q8IWZ5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM42Q8IWZ5 AC244015.2-201ENST00000616358 1861 ntBASIC21.67■■□□□ 1.06
TRIM42Q8IWZ5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM42Q8IWZ5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.67■■□□□ 1.06
TRIM42Q8IWZ5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM42Q8IWZ5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM42Q8IWZ5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 RARRES2P1-201ENST00000474487 481 ntBASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM42Q8IWZ5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 PVT1_1.1-201ENST00000615125 194 ntBASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TRIM42Q8IWZ5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TRIM42Q8IWZ5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
TRIM42Q8IWZ5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM42Q8IWZ5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM42Q8IWZ5 AC009086.3-201ENST00000623486 1008 ntBASIC21.64■■□□□ 1.05
TRIM42Q8IWZ5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM42Q8IWZ5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
TRIM42Q8IWZ5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM42Q8IWZ5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM42Q8IWZ5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM42Q8IWZ5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM42Q8IWZ5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 KRT8P33-201ENST00000508125 1423 ntBASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM42Q8IWZ5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms