Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIM48Q8IWZ4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 AC012414.1-201ENST00000556676 535 ntBASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 AL354811.1-201ENST00000610286 706 ntBASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TRIM48Q8IWZ4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 AC097381.1-201ENST00000429019 1296 ntBASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 MIR6821-201ENST00000617625 74 ntBASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIM48Q8IWZ4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 MIR6084-201ENST00000622012 110 ntBASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 AC105233.4-201ENST00000642045 216 ntBASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
TRIM48Q8IWZ4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TRIM48Q8IWZ4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM48Q8IWZ4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.33■■□□□ 1
TRIM48Q8IWZ4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRIM48Q8IWZ4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
TRIM48Q8IWZ4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 AC010141.3-201ENST00000456659 717 ntBASIC21.32■■□□□ 1
TRIM48Q8IWZ4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRIM48Q8IWZ4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 YBX1P1-201ENST00000445822 960 ntBASIC21.31■■□□□ 1
TRIM48Q8IWZ4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 AC087623.3-201ENST00000607047 1098 ntBASIC21.31■■□□□ 1
TRIM48Q8IWZ4 AL031602.1-201ENST00000633169 911 ntBASIC21.31■■□□□ 1
TRIM48Q8IWZ4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRIM48Q8IWZ4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM48Q8IWZ4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms