Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 CDCA4P2-201ENST00000441182 718 ntBASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 OXCT2P1-201ENST00000447263 1535 ntBASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.25■■□□□ 1.15
SFTPA1Q8IWL2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SFTPA1Q8IWL2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 AC016769.1-201ENST00000409132 1010 ntBASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 HLA-L-209ENST00000420110 1011 ntBASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 AC087239.1-201ENST00000622671 572 ntBASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 AC073111.5-205ENST00000641717 521 ntBASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SFTPA1Q8IWL2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SFTPA1Q8IWL2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SFTPA1Q8IWL2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SFTPA1Q8IWL2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.2■■□□□ 1.14
SFTPA1Q8IWL2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SFTPA1Q8IWL2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.18■■□□□ 1.14
SFTPA1Q8IWL2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.18■■□□□ 1.14
SFTPA1Q8IWL2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SFTPA1Q8IWL2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.17■■□□□ 1.14
SFTPA1Q8IWL2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms