Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB43Q86YS6 AL117328.2-201ENST00000624617 1940 ntBASIC20.72■□□□□ 0.91
RAB43Q86YS6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.72■□□□□ 0.91
RAB43Q86YS6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.72■□□□□ 0.91
RAB43Q86YS6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RAB43Q86YS6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 MIR6084-201ENST00000622012 110 ntBASIC20.72■□□□□ 0.91
RAB43Q86YS6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RAB43Q86YS6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.72■□□□□ 0.91
RAB43Q86YS6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
RAB43Q86YS6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB43Q86YS6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.71■□□□□ 0.91
RAB43Q86YS6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.71■□□□□ 0.91
RAB43Q86YS6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 PKD1P6-201ENST00000343738 4769 ntBASIC20.71■□□□□ 0.91
RAB43Q86YS6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.71■□□□□ 0.91
RAB43Q86YS6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.71■□□□□ 0.91
RAB43Q86YS6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB43Q86YS6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAB43Q86YS6 AL024507.2-201ENST00000606070 2574 ntBASIC20.7■□□□□ 0.9
RAB43Q86YS6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RAB43Q86YS6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB43Q86YS6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB43Q86YS6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB43Q86YS6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB43Q86YS6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB43Q86YS6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB43Q86YS6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB43Q86YS6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB43Q86YS6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB43Q86YS6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB43Q86YS6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 AL031602.1-201ENST00000633169 911 ntBASIC20.69■□□□□ 0.9
RAB43Q86YS6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB43Q86YS6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB43Q86YS6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RAB43Q86YS6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB43Q86YS6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB43Q86YS6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB43Q86YS6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.68■□□□□ 0.9
RAB43Q86YS6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.68■□□□□ 0.9
RAB43Q86YS6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB43Q86YS6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB43Q86YS6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB43Q86YS6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB43Q86YS6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB43Q86YS6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB43Q86YS6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB43Q86YS6 KRT18P5-201ENST00000436075 1291 ntBASIC20.67■□□□□ 0.9
RAB43Q86YS6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB43Q86YS6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB43Q86YS6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB43Q86YS6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB43Q86YS6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB43Q86YS6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB43Q86YS6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB43Q86YS6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB43Q86YS6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB43Q86YS6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RAB43Q86YS6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms