Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC25Q86WR0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 TSPY13P-201ENST00000338964 914 ntBASIC22.46■■□□□ 1.19
CCDC25Q86WR0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC25Q86WR0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC25Q86WR0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC25Q86WR0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC25Q86WR0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC25Q86WR0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
CCDC25Q86WR0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC25Q86WR0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC25Q86WR0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC25Q86WR0 MIR4508-201ENST00000584178 70 ntBASIC22.42■■□□□ 1.18
CCDC25Q86WR0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC25Q86WR0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CCDC25Q86WR0 KRT8P33-201ENST00000508125 1423 ntBASIC22.4■■□□□ 1.18
CCDC25Q86WR0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 AC005703.6-201ENST00000623265 1329 ntBASIC22.4■■□□□ 1.18
CCDC25Q86WR0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC25Q86WR0 FP325331.1-202ENST00000623531 1380 ntBASIC22.39■■□□□ 1.18
CCDC25Q86WR0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.18
CCDC25Q86WR0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC25Q86WR0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC25Q86WR0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC25Q86WR0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC25Q86WR0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms