Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 AC133552.2-202ENST00000575694 574 ntBASIC18.66■□□□□ 0.58
CSMD2Q7Z408 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 AC007322.1-201ENST00000426983 750 ntBASIC18.66■□□□□ 0.58
CSMD2Q7Z408 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSMD2Q7Z408 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.65■□□□□ 0.58
CSMD2Q7Z408 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 RARRES2P4-201ENST00000514074 484 ntBASIC18.65■□□□□ 0.58
CSMD2Q7Z408 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.65■□□□□ 0.58
CSMD2Q7Z408 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.64■□□□□ 0.58
CSMD2Q7Z408 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CSMD2Q7Z408 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.64■□□□□ 0.58
CSMD2Q7Z408 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 AC128676.1-201ENST00000454392 318 ntBASIC18.64■□□□□ 0.57
CSMD2Q7Z408 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.64■□□□□ 0.57
CSMD2Q7Z408 AC010331.1-201ENST00000611423 582 ntBASIC18.64■□□□□ 0.57
CSMD2Q7Z408 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 MIR1224-201ENST00000408193 85 ntBASIC18.63■□□□□ 0.57
CSMD2Q7Z408 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CSMD2Q7Z408 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 FAM210CP-201ENST00000445714 574 ntBASIC18.62■□□□□ 0.57
CSMD2Q7Z408 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 AC008550.1-201ENST00000511500 884 ntBASIC18.62■□□□□ 0.57
CSMD2Q7Z408 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.62■□□□□ 0.57
CSMD2Q7Z408 AL158047.1-201ENST00000445918 881 ntBASIC18.61■□□□□ 0.57
CSMD2Q7Z408 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 RPS2P4-201ENST00000476944 856 ntBASIC18.61■□□□□ 0.57
CSMD2Q7Z408 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 AC079140.4-201ENST00000507448 529 ntBASIC18.61■□□□□ 0.57
CSMD2Q7Z408 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD2Q7Z408 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms