Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC087742.1-201ENST00000575880 1738 ntBASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD3Q7Z3D4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 AC126544.1-201ENST00000580842 1059 ntBASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD3Q7Z3D4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 AC091305.1-201ENST00000479476 895 ntBASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD3Q7Z3D4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 CA15P2-201ENST00000611168 834 ntBASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD3Q7Z3D4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 RASA4CP-201ENST00000424092 1398 ntBASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD3Q7Z3D4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LYSMD3Q7Z3D4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
LYSMD3Q7Z3D4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LYSMD3Q7Z3D4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 AP005435.1-201ENST00000529293 1178 ntBASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
LYSMD3Q7Z3D4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 AC068587.7-201ENST00000641602 218 ntBASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
LYSMD3Q7Z3D4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD3Q7Z3D4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.86■■□□□ 1.09
LYSMD3Q7Z3D4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.86■■□□□ 1.09
LYSMD3Q7Z3D4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms