Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AC006455.2-201ENST00000429931 906 ntBASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 KATNBL1P4-201ENST00000503545 918 ntBASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.67■■□□□ 1.54
PPP4R3CPQ6ZMV5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC013470.3-201ENST00000420252 1194 ntBASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 AL031432.3-201ENST00000607698 485 ntBASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC009086.3-201ENST00000623486 1008 ntBASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC133561.1-201ENST00000568600 2415 ntBASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC005014.3-201ENST00000605985 190 ntBASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC011298.3-201ENST00000615796 283 ntBASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 C9orf163-202ENST00000624034 2573 ntBASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.65■■□□□ 1.54
PPP4R3CPQ6ZMV5 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PPP4R3CPQ6ZMV5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PPP4R3CPQ6ZMV5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
PPP4R3CPQ6ZMV5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PPP4R3CPQ6ZMV5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.64■■□□□ 1.53
PPP4R3CPQ6ZMV5 AC144652.1-201ENST00000609974 1624 ntBASIC24.64■■□□□ 1.53
PPP4R3CPQ6ZMV5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
PPP4R3CPQ6ZMV5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.63■■□□□ 1.53
PPP4R3CPQ6ZMV5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PPP4R3CPQ6ZMV5 EDA-201ENST00000338901 1233 ntBASIC24.63■■□□□ 1.53
PPP4R3CPQ6ZMV5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.63■■□□□ 1.53
PPP4R3CPQ6ZMV5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PPP4R3CPQ6ZMV5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PPP4R3CPQ6ZMV5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.63■■□□□ 1.53
PPP4R3CPQ6ZMV5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 MTDHP1-201ENST00000605323 784 ntBASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PPP4R3CPQ6ZMV5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 SUDS3P1-201ENST00000505831 966 ntBASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 AL353803.4-201ENST00000565882 1934 ntBASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.61■■□□□ 1.53
PPP4R3CPQ6ZMV5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PPP4R3CPQ6ZMV5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 FP325331.1-202ENST00000623531 1380 ntBASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 MIR3181-201ENST00000578512 73 ntBASIC24.59■■□□□ 1.53
PPP4R3CPQ6ZMV5 MIR4767-201ENST00000582827 78 ntBASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms