Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 AC016769.1-201ENST00000409132 1010 ntBASIC19.97■□□□□ 0.79
RPUSD3Q6P087 AC010141.3-201ENST00000456659 717 ntBASIC19.97■□□□□ 0.79
RPUSD3Q6P087 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPUSD3Q6P087 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RPUSD3Q6P087 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPUSD3Q6P087 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.96■□□□□ 0.79
RPUSD3Q6P087 AC080038.1-201ENST00000611274 1154 ntBASIC19.96■□□□□ 0.79
RPUSD3Q6P087 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPUSD3Q6P087 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.96■□□□□ 0.79
RPUSD3Q6P087 AP004607.4-201ENST00000530158 1459 ntBASIC19.95■□□□□ 0.78
RPUSD3Q6P087 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 AC137761.2-201ENST00000561729 223 ntBASIC19.95■□□□□ 0.78
RPUSD3Q6P087 AC145350.3-201ENST00000569033 163 ntBASIC19.95■□□□□ 0.78
RPUSD3Q6P087 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 AC079630.1-202ENST00000618127 1840 ntBASIC19.95■□□□□ 0.78
RPUSD3Q6P087 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.95■□□□□ 0.78
RPUSD3Q6P087 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 KRT18P61-201ENST00000585825 1298 ntBASIC19.94■□□□□ 0.78
RPUSD3Q6P087 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.94■□□□□ 0.78
RPUSD3Q6P087 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 KRT19P1-201ENST00000405746 1186 ntBASIC19.93■□□□□ 0.78
RPUSD3Q6P087 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 AC004687.1-201ENST00000579003 1625 ntBASIC19.93■□□□□ 0.78
RPUSD3Q6P087 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPUSD3Q6P087 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPUSD3Q6P087 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.91■□□□□ 0.78
RPUSD3Q6P087 SMUG1P1-201ENST00000590640 811 ntBASIC19.91■□□□□ 0.78
RPUSD3Q6P087 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms