Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
RNF213Q63HN8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RNF213Q63HN8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 BX276092.2-201ENST00000417668 665 ntBASIC11.89□□□□□ -0.51
RNF213Q63HN8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RNF213Q63HN8 KRT87P-202ENST00000534226 1464 ntBASIC11.89□□□□□ -0.51
RNF213Q63HN8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RNF213Q63HN8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 CYP2T1P-201ENST00000432607 1285 ntBASIC11.88□□□□□ -0.51
RNF213Q63HN8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RNF213Q63HN8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RNF213Q63HN8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 AL049597.2-201ENST00000565575 961 ntBASIC11.87□□□□□ -0.51
RNF213Q63HN8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 AC087499.1-201ENST00000418141 1075 ntBASIC11.87□□□□□ -0.51
RNF213Q63HN8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 AC079140.4-201ENST00000507448 529 ntBASIC11.87□□□□□ -0.51
RNF213Q63HN8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RNF213Q63HN8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RNF213Q63HN8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.86□□□□□ -0.51
RNF213Q63HN8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RNF213Q63HN8 ABCB10P1-201ENST00000614297 2181 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms