Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.78■□□□□ 0.76
RNFT1Q5M7Z0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNFT1Q5M7Z0 AC092068.2-201ENST00000590491 1708 ntBASIC19.78■□□□□ 0.76
RNFT1Q5M7Z0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RNFT1Q5M7Z0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.77■□□□□ 0.76
RNFT1Q5M7Z0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 AP004607.4-201ENST00000530158 1459 ntBASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 AC004854.2-201ENST00000608450 1441 ntBASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RNFT1Q5M7Z0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNFT1Q5M7Z0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNFT1Q5M7Z0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNFT1Q5M7Z0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNFT1Q5M7Z0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNFT1Q5M7Z0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNFT1Q5M7Z0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNFT1Q5M7Z0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNFT1Q5M7Z0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNFT1Q5M7Z0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 AC006015.1-201ENST00000429970 570 ntBASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNFT1Q5M7Z0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RNFT1Q5M7Z0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNFT1Q5M7Z0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNFT1Q5M7Z0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNFT1Q5M7Z0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNFT1Q5M7Z0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNFT1Q5M7Z0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.69■□□□□ 0.74
RNFT1Q5M7Z0 AC137761.2-201ENST00000561729 223 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms