Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM1Q5H8C1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FREM1Q5H8C1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.28■□□□□ 0.68
FREM1Q5H8C1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
FREM1Q5H8C1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FREM1Q5H8C1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.28■□□□□ 0.68
FREM1Q5H8C1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FREM1Q5H8C1 AC087742.1-201ENST00000575880 1738 ntBASIC19.27■□□□□ 0.68
FREM1Q5H8C1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.26■□□□□ 0.67
FREM1Q5H8C1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FREM1Q5H8C1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.26■□□□□ 0.67
FREM1Q5H8C1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.26■□□□□ 0.67
FREM1Q5H8C1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FREM1Q5H8C1 C1orf229-201ENST00000623686 2258 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4L2-201ENST00000561772 1275 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
FREM1Q5H8C1 MIR6821-201ENST00000617625 74 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4L6-201ENST00000626483 1275 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4L1-201ENST00000627662 1275 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4L8-201ENST00000629013 1275 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4L3-201ENST00000630187 1275 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4L7-201ENST00000630678 1275 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 DUX4L5-201ENST00000630834 1275 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 AC068587.7-201ENST00000641602 218 ntBASIC19.26■□□□□ 0.67
FREM1Q5H8C1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
FREM1Q5H8C1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 TPRG1LP1-201ENST00000598702 760 ntBASIC19.24■□□□□ 0.67
FREM1Q5H8C1 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
FREM1Q5H8C1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 KRT18P14-201ENST00000534205 1250 ntBASIC19.23■□□□□ 0.67
FREM1Q5H8C1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 AL354811.1-201ENST00000610286 706 ntBASIC19.23■□□□□ 0.67
FREM1Q5H8C1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.23■□□□□ 0.67
FREM1Q5H8C1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 AC123595.1-201ENST00000440769 1046 ntBASIC19.22■□□□□ 0.67
FREM1Q5H8C1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FREM1Q5H8C1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms