Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
KRTCAP3Q53RY4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 AC026185.1-201ENST00000445748 174 ntBASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 AC079140.4-201ENST00000507448 529 ntBASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRTCAP3Q53RY4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 CDCA4P2-201ENST00000441182 718 ntBASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 AC073111.5-205ENST00000641717 521 ntBASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRTCAP3Q53RY4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 HLA-L-209ENST00000420110 1011 ntBASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRTCAP3Q53RY4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 AC009237.3-201ENST00000393279 1427 ntBASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 RAP2CP1-201ENST00000605103 478 ntBASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRTCAP3Q53RY4 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRTCAP3Q53RY4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.58■□□□□ 0.73
KRTCAP3Q53RY4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
KRTCAP3Q53RY4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRTCAP3Q53RY4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
KRTCAP3Q53RY4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.58■□□□□ 0.72
KRTCAP3Q53RY4 ABCB10P4-201ENST00000566803 2184 ntBASIC19.58■□□□□ 0.72
KRTCAP3Q53RY4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.58■□□□□ 0.72
KRTCAP3Q53RY4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRTCAP3Q53RY4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRTCAP3Q53RY4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 DUSP8P3-201ENST00000399571 1760 ntBASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms