Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM35AQ53FP2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM35AQ53FP2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM35AQ53FP2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
TMEM35AQ53FP2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM35AQ53FP2 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM35AQ53FP2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 AC010141.3-201ENST00000456659 717 ntBASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 AC233992.3-201ENST00000607491 485 ntBASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 AC110285.6-201ENST00000617652 491 ntBASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM35AQ53FP2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 EDA-201ENST00000338901 1233 ntBASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 AC080038.3-201ENST00000623346 1952 ntBASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM35AQ53FP2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 AC139530.1-201ENST00000575312 1977 ntBASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 AC079089.2-201ENST00000531211 1277 ntBASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM35AQ53FP2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 AC133561.4-201ENST00000566112 224 ntBASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM35AQ53FP2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 AL139246.5-201ENST00000606645 996 ntBASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM35AQ53FP2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 LINC00526-201ENST00000581067 1875 ntBASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 AL355001.2-201ENST00000620617 1191 ntBASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 OXCT2P1-201ENST00000447263 1535 ntBASIC20.71■□□□□ 0.91
TMEM35AQ53FP2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms