Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC01554Q52M75 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01554Q52M75 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC01554Q52M75 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01554Q52M75 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01554Q52M75 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 TERT-206ENST00000508104 2486 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 PEX7-203ENST00000541292 945 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 AC021231.2-201ENST00000594613 730 ntBASIC10.91□□□□□ -0.66
LINC01554Q52M75 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01554Q52M75 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01554Q52M75 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
LINC01554Q52M75 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01554Q52M75 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC10.9□□□□□ -0.66
LINC01554Q52M75 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01554Q52M75 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01554Q52M75 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC01554Q52M75 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01554Q52M75 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC10.9□□□□□ -0.66
LINC01554Q52M75 AL162393.1-201ENST00000437852 946 ntBASIC10.9□□□□□ -0.66
LINC01554Q52M75 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
LINC01554Q52M75 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01554Q52M75 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
LINC01554Q52M75 AC020916.1-201ENST00000587762 1774 ntBASIC10.9□□□□□ -0.67
LINC01554Q52M75 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LINC01554Q52M75 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC10.9□□□□□ -0.67
LINC01554Q52M75 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 AC022211.4-201ENST00000625094 2161 ntBASIC10.89□□□□□ -0.67
LINC01554Q52M75 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 CHST11-202ENST00000546689 756 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 AC233723.2-201ENST00000623798 2106 ntBASIC10.89□□□□□ -0.67
LINC01554Q52M75 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 AC097639.1-201ENST00000565519 1891 ntBASIC10.89□□□□□ -0.67
LINC01554Q52M75 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LINC01554Q52M75 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC10.89□□□□□ -0.67
LINC01554Q52M75 AC142381.3-201ENST00000568208 1670 ntBASIC10.89□□□□□ -0.67
LINC01554Q52M75 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 FZD10-202ENST00000539839 3282 ntBASIC10.88□□□□□ -0.67
LINC01554Q52M75 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC10.88□□□□□ -0.67
LINC01554Q52M75 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LINC01554Q52M75 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms