Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01559Q495D7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LINC01559Q495D7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01559Q495D7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC01559Q495D7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
LINC01559Q495D7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01559Q495D7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01559Q495D7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
LINC01559Q495D7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01559Q495D7 SNX5-217ENST00000606557 1087 ntBASIC16.21■□□□□ 0.19
LINC01559Q495D7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
LINC01559Q495D7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01559Q495D7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01559Q495D7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
LINC01559Q495D7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01559Q495D7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LINC01559Q495D7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC01559Q495D7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.2■□□□□ 0.18
LINC01559Q495D7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.2■□□□□ 0.18
LINC01559Q495D7 BHLHE23-202ENST00000612929 1109 ntBASIC16.2■□□□□ 0.18
LINC01559Q495D7 AC009086.3-201ENST00000623486 1008 ntBASIC16.2■□□□□ 0.18
LINC01559Q495D7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01559Q495D7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01559Q495D7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01559Q495D7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01559Q495D7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01559Q495D7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC01559Q495D7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01559Q495D7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC01559Q495D7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LINC01559Q495D7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.19■□□□□ 0.18
LINC01559Q495D7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC01559Q495D7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01559Q495D7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
LINC01559Q495D7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01559Q495D7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01559Q495D7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC01559Q495D7 AC090142.2-201ENST00000483263 416 ntBASIC16.18■□□□□ 0.18
LINC01559Q495D7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01559Q495D7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.18■□□□□ 0.18
LINC01559Q495D7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01559Q495D7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LINC01559Q495D7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
LINC01559Q495D7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01559Q495D7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC01559Q495D7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 MTATP6P19-201ENST00000413797 659 ntBASIC16.17■□□□□ 0.18
LINC01559Q495D7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC01559Q495D7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01559Q495D7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01559Q495D7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LINC01559Q495D7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01559Q495D7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01559Q495D7 PVT1_1.1-201ENST00000615125 194 ntBASIC16.16■□□□□ 0.18
LINC01559Q495D7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01559Q495D7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01559Q495D7 AC244015.2-201ENST00000616358 1861 ntBASIC16.16■□□□□ 0.18
LINC01559Q495D7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01559Q495D7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LINC01559Q495D7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms