Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 CHS2YBR038W 2892 nt4.34□□□□□ -1.71
TY1B-NL1Q12112 LCL2YLR104W 396 nt4.34□□□□□ -1.71
TY1B-NL1Q12112 ATG3YNR007C 933 nt4.34□□□□□ -1.71
TY1B-NL1Q12112 YOR283WYOR283W 693 nt4.34□□□□□ -1.71
TY1B-NL1Q12112 AYT1YLL063C 1425 nt4.34□□□□□ -1.71
TY1B-NL1Q12112 PMS1YNL082W 2622 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 SAC1YKL212W 1872 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 FRE7YOL152W 1863 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 DCV1YFR012W 609 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 YGR016WYGR016W 573 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 YGR079WYGR079W 1113 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 YFL040WYFL040W 1623 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 YDR186CYDR186C 2634 nt4.33□□□□□ -1.72
TY1B-NL1Q12112 GFA1YKL104C 2154 nt4.32□□□□□ -1.72
TY1B-NL1Q12112 PEF1YGR058W 1008 nt4.32□□□□□ -1.72
TY1B-NL1Q12112 TRE1YPL176C 2352 nt4.32□□□□□ -1.72
TY1B-NL1Q12112 ESL2YKR096W 3588 nt4.32□□□□□ -1.72
TY1B-NL1Q12112 MDM34YGL219C 1380 nt4.32□□□□□ -1.72
TY1B-NL1Q12112 SLD2YKL108W 1362 nt4.32□□□□□ -1.72
TY1B-NL1Q12112 YMR294W-AYMR294W-A 360 nt4.31□□□□□ -1.72
TY1B-NL1Q12112 ENA5YDR038C 3276 nt4.31□□□□□ -1.72
TY1B-NL1Q12112 TRM44YPL030W 1704 nt4.31□□□□□ -1.72
TY1B-NL1Q12112 CIN8YEL061C 3003 nt4.31□□□□□ -1.72
TY1B-NL1Q12112 YMR315WYMR315W 1050 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 YPR050CYPR050C 414 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 HEF3YNL014W 3135 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 TSC11YER093C 4293 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 COX17YLL009C 210 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 ADD37YMR184W 597 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 TOM40YMR203W 1164 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 YPR003CYPR003C 2265 nt4.3□□□□□ -1.72
TY1B-NL1Q12112 SEC9YGR009C 1956 nt4.29□□□□□ -1.72
TY1B-NL1Q12112 RPA135YPR010C 3612 nt4.29□□□□□ -1.72
TY1B-NL1Q12112 snR70snR70 164 nt4.29□□□□□ -1.72
TY1B-NL1Q12112 SPO16YHR153C 597 nt4.29□□□□□ -1.72
TY1B-NL1Q12112 FYV5YCL058C 459 nt4.29□□□□□ -1.72
TY1B-NL1Q12112 NTH1YDR001C 2256 nt4.29□□□□□ -1.72
TY1B-NL1Q12112 ARO10YDR380W 1908 nt4.29□□□□□ -1.72
TY1B-NL1Q12112 CIT3YPR001W 1461 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 RAX2YLR084C 3663 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 PSF1YDR013W 627 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 ATP5YDR298C 639 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 YPL168WYPL168W 1293 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 CIT1YNR001C 1440 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 DBP3YGL078C 1572 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 TRS85YDR108W 2097 nt4.28□□□□□ -1.72
TY1B-NL1Q12112 TDA5YLR426W 981 nt4.27□□□□□ -1.73
TY1B-NL1Q12112 SME1YOR159C 285 nt4.27□□□□□ -1.73
TY1B-NL1Q12112 VPS17YOR132W 1656 nt4.27□□□□□ -1.73
TY1B-NL1Q12112 BUD5YCR038C 1929 nt4.27□□□□□ -1.73
TY1B-NL1Q12112 GPI1YGR216C 1830 nt4.27□□□□□ -1.73
TY1B-NL1Q12112 FAP7YDL166C 594 nt4.26□□□□□ -1.73
TY1B-NL1Q12112 ATG27YJL178C 816 nt4.26□□□□□ -1.73
TY1B-NL1Q12112 ICY1YMR195W 384 nt4.26□□□□□ -1.73
TY1B-NL1Q12112 YBR298C-AYBR298C-A 222 nt4.26□□□□□ -1.73
TY1B-NL1Q12112 PSK2YOL045W 3306 nt4.25□□□□□ -1.73
TY1B-NL1Q12112 RPP1AYDL081C 321 nt4.25□□□□□ -1.73
TY1B-NL1Q12112 YHL005CYHL005C 393 nt4.25□□□□□ -1.73
TY1B-NL1Q12112 MIT1YEL007W 2001 nt4.25□□□□□ -1.73
TY1B-NL1Q12112 YLR278CYLR278C 4026 nt4.25□□□□□ -1.73
TY1B-NL1Q12112 PTP3YER075C 2787 nt4.24□□□□□ -1.73
TY1B-NL1Q12112 PRR2YDL214C 2100 nt4.24□□□□□ -1.73
TY1B-NL1Q12112 YFL051CYFL051C 483 nt4.24□□□□□ -1.73
TY1B-NL1Q12112 YGR122WYGR122W 1209 nt4.24□□□□□ -1.73
TY1B-NL1Q12112 OM14YBR230C 405 nt4.24□□□□□ -1.73
TY1B-NL1Q12112 CAJ1YER048C 1176 nt4.23□□□□□ -1.73
TY1B-NL1Q12112 SAW1YAL027W 786 nt4.23□□□□□ -1.73
TY1B-NL1Q12112 CUZ1YNL155W 825 nt4.23□□□□□ -1.73
TY1B-NL1Q12112 RPL23AYBL087C 414 nt4.23□□□□□ -1.73
TY1B-NL1Q12112 CDC16YKL022C 2523 nt4.23□□□□□ -1.73
TY1B-NL1Q12112 JJJ1YNL227C 1773 nt4.23□□□□□ -1.73
TY1B-NL1Q12112 YKR070WYKR070W 1059 nt4.22□□□□□ -1.73
TY1B-NL1Q12112 PEX1YKL197C 3132 nt4.22□□□□□ -1.73
TY1B-NL1Q12112 ATG18YFR021W 1503 nt4.22□□□□□ -1.73
TY1B-NL1Q12112 RAD1YPL022W 3303 nt4.22□□□□□ -1.73
TY1B-NL1Q12112 EMC1YCL045C 2283 nt4.22□□□□□ -1.73
TY1B-NL1Q12112 JIP3YLR331C 378 nt4.22□□□□□ -1.73
TY1B-NL1Q12112 MCP2YLR253W 1710 nt4.22□□□□□ -1.73
TY1B-NL1Q12112 SPP41YDR464W 4308 nt4.21□□□□□ -1.74
TY1B-NL1Q12112 SIZ1YDR409W 2715 nt4.21□□□□□ -1.74
TY1B-NL1Q12112 YHR078WYHR078W 1659 nt4.21□□□□□ -1.74
TY1B-NL1Q12112 YOL019WYOL019W 1656 nt4.21□□□□□ -1.74
TY1B-NL1Q12112 UBC1YDR177W 648 nt4.21□□□□□ -1.74
TY1B-NL1Q12112 TOS8YGL096W 831 nt4.21□□□□□ -1.74
TY1B-NL1Q12112 KRS1YDR037W 1776 nt4.21□□□□□ -1.74
TY1B-NL1Q12112 SNF3YDL194W 2655 nt4.2□□□□□ -1.74
TY1B-NL1Q12112 RAD33YML011C 534 nt4.2□□□□□ -1.74
TY1B-NL1Q12112 KTI11YBL071W-A 249 nt4.2□□□□□ -1.74
TY1B-NL1Q12112 NEW1YPL226W 3591 nt4.2□□□□□ -1.74
TY1B-NL1Q12112 UBP1YDL122W 2430 nt4.2□□□□□ -1.74
TY1B-NL1Q12112 PRP22YER013W 3438 nt4.2□□□□□ -1.74
TY1B-NL1Q12112 WSS1YHR134W 810 nt4.19□□□□□ -1.74
TY1B-NL1Q12112 YOR338WYOR338W 1092 nt4.19□□□□□ -1.74
TY1B-NL1Q12112 APM4YOL062C 1476 nt4.19□□□□□ -1.74
TY1B-NL1Q12112 CLB3YDL155W 1284 nt4.19□□□□□ -1.74
TY1B-NL1Q12112 YLR374CYLR374C 390 nt4.19□□□□□ -1.74
TY1B-NL1Q12112 GCR2YNL199C 1605 nt4.19□□□□□ -1.74
TY1B-NL1Q12112 YEL025CYEL025C 3567 nt4.19□□□□□ -1.74
TY1B-NL1Q12112 YGL140CYGL140C 3660 nt4.18□□□□□ -1.74
TY1B-NL1Q12112 SMF1YOL122C 1728 nt4.18□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms