Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 ATP19YOL077W-A 207 nt5.47□□□□□ -1.53 RIP-Chip
UBP3Q01477 snR11snR11 258 nt5.47□□□□□ -1.53
UBP3Q01477 YOR314WYOR314W 330 nt5.47□□□□□ -1.53
UBP3Q01477 TRS20YBR254C 528 nt5.47□□□□□ -1.53
UBP3Q01477 SAC1YKL212W 1872 nt5.47□□□□□ -1.53
UBP3Q01477 PRR1YKL116C 1557 nt5.46□□□□□ -1.53
UBP3Q01477 SEC9YGR009C 1956 nt5.46□□□□□ -1.54
UBP3Q01477 NDC1YML031W 1968 nt5.46□□□□□ -1.54 RIP-Chip
UBP3Q01477 YCR001WYCR001W 315 nt5.46□□□□□ -1.54
UBP3Q01477 YDR118W-AYDR118W-A 117 nt5.46□□□□□ -1.54
UBP3Q01477 RSM28YDR494W 1086 nt5.46□□□□□ -1.54
UBP3Q01477 TYS1YGR185C 1185 nt5.46□□□□□ -1.54 RIP-Chip
UBP3Q01477 IME1YJR094C 1083 nt5.46□□□□□ -1.54 RIP-Chip
UBP3Q01477 AUR1YKL004W 1206 nt5.46□□□□□ -1.54 RIP-Chip
UBP3Q01477 MRPL17YNL252C 846 nt5.46□□□□□ -1.54
UBP3Q01477 MFM1YPL060W 1242 nt5.46□□□□□ -1.54
UBP3Q01477 OPY2YPR075C 1083 nt5.46□□□□□ -1.54
UBP3Q01477 ADE4YMR300C 1533 nt5.46□□□□□ -1.54
UBP3Q01477 ALE1YOR175C 1860 nt5.45□□□□□ -1.54 RIP-Chip
UBP3Q01477 YFL040WYFL040W 1623 nt5.45□□□□□ -1.54
UBP3Q01477 KEX1YGL203C 2190 nt5.45□□□□□ -1.54
UBP3Q01477 CDC6YJL194W 1542 nt5.45□□□□□ -1.54
UBP3Q01477 BOI2YER114C 3123 nt5.45□□□□□ -1.54
UBP3Q01477 YDL027CYDL027C 1263 nt5.45□□□□□ -1.54
UBP3Q01477 OCA6YDR067C 675 nt5.45□□□□□ -1.54
UBP3Q01477 LSM4YER112W 564 nt5.45□□□□□ -1.54 RIP-Chip
UBP3Q01477 YFR035CYFR035C 345 nt5.45□□□□□ -1.54
UBP3Q01477 MIC26YGR235C 702 nt5.45□□□□□ -1.54
UBP3Q01477 YHL009W-AYHL009W-A 1242 nt5.45□□□□□ -1.54
UBP3Q01477 RPL27AYHR010W 411 nt5.45□□□□□ -1.54 RIP-Chip
UBP3Q01477 SYS1YJL004C 612 nt5.45□□□□□ -1.54
UBP3Q01477 NIT2YJL126W 924 nt5.45□□□□□ -1.54
UBP3Q01477 RPS1BYML063W 768 nt5.45□□□□□ -1.54
UBP3Q01477 MPP6YNR024W 561 nt5.45□□□□□ -1.54
UBP3Q01477 ISU2YOR226C 471 nt5.45□□□□□ -1.54
UBP3Q01477 UAF30YOR295W 687 nt5.45□□□□□ -1.54
UBP3Q01477 RPN4YDL020C 1596 nt5.45□□□□□ -1.54
UBP3Q01477 NRD1YNL251C 1728 nt5.45□□□□□ -1.54
UBP3Q01477 ERG9YHR190W 1335 nt5.45□□□□□ -1.54
UBP3Q01477 THP1YOL072W 1368 nt5.44□□□□□ -1.54 RIP-Chip
UBP3Q01477 EAR1YMR171C 1653 nt5.44□□□□□ -1.54
UBP3Q01477 YEL010WYEL010W 351 nt5.44□□□□□ -1.54
UBP3Q01477 ISC10YER180C 804 nt5.44□□□□□ -1.54 RIP-Chip
UBP3Q01477 GON7YJL184W 372 nt5.44□□□□□ -1.54
UBP3Q01477 BUD19YJL188C 309 nt5.44□□□□□ -1.54
UBP3Q01477 EOS1YNL080C 1101 nt5.44□□□□□ -1.54 RIP-Chip
UBP3Q01477 YOL013W-BYOL013W-B 291 nt5.44□□□□□ -1.54
UBP3Q01477 YOL150CYOL150C 312 nt5.44□□□□□ -1.54
UBP3Q01477 YHR182WYHR182W 2358 nt5.43□□□□□ -1.54
UBP3Q01477 SPT15YER148W 723 nt5.43□□□□□ -1.54
UBP3Q01477 GAT4YIR013C 366 nt5.43□□□□□ -1.54
UBP3Q01477 GLG2YJL137C 1143 nt5.43□□□□□ -1.54
UBP3Q01477 STE18YJR086W 333 nt5.43□□□□□ -1.54
UBP3Q01477 RFU1YLR073C 603 nt5.43□□□□□ -1.54
UBP3Q01477 MCK1YNL307C 1128 nt5.43□□□□□ -1.54
UBP3Q01477 HSP26YBR072W 645 nt5.43□□□□□ -1.54
UBP3Q01477 SYG1YIL047C 2709 nt5.43□□□□□ -1.54 RIP-Chip
UBP3Q01477 GRS1YBR121C 2004 nt5.43□□□□□ -1.54
UBP3Q01477 YND1YER005W 1893 nt5.43□□□□□ -1.54
UBP3Q01477 BIT2YBR270C 1638 nt5.42□□□□□ -1.54 RIP-Chip
UBP3Q01477 SPB4YFL002C 1821 nt5.42□□□□□ -1.54
UBP3Q01477 SEG2YKL105C 3399 nt5.42□□□□□ -1.54 RIP-Chip
UBP3Q01477 RPN12YFR052W 825 nt5.42□□□□□ -1.54
UBP3Q01477 ECT1YGR007W 972 nt5.42□□□□□ -1.54 RIP-Chip
UBP3Q01477 BET4YJL031C 984 nt5.42□□□□□ -1.54
UBP3Q01477 APQ13YJL075C 417 nt5.42□□□□□ -1.54
UBP3Q01477 YAE1YJR067C 426 nt5.42□□□□□ -1.54
UBP3Q01477 LDB18YLL049W 540 nt5.42□□□□□ -1.54 RIP-Chip
UBP3Q01477 YLR406C-AYLR406C-A 150 nt5.42□□□□□ -1.54
UBP3Q01477 SAS2YMR127C 1017 nt5.42□□□□□ -1.54
UBP3Q01477 MIC27YNL100W 705 nt5.42□□□□□ -1.54
UBP3Q01477 PFK27YOL136C 1194 nt5.42□□□□□ -1.54
UBP3Q01477 SGT1YOR057W 1188 nt5.42□□□□□ -1.54
UBP3Q01477 UTP5YDR398W 1932 nt5.42□□□□□ -1.54 RIP-Chip
UBP3Q01477 JEM1YJL073W 1938 nt5.42□□□□□ -1.54
UBP3Q01477 YRB30YGL164C 1323 nt5.42□□□□□ -1.54
UBP3Q01477 CUE2YKL090W 1332 nt5.42□□□□□ -1.54
UBP3Q01477 OAF1YAL051W 3144 nt5.41□□□□□ -1.54 RIP-Chip
UBP3Q01477 PHO87YCR037C 2772 nt5.41□□□□□ -1.54 RIP-Chip
UBP3Q01477 NOC4YPR144C 1659 nt5.41□□□□□ -1.54
UBP3Q01477 YCL075WYCL075W 441 nt5.41□□□□□ -1.54
UBP3Q01477 YER084WYER084W 387 nt5.41□□□□□ -1.54
UBP3Q01477 SPL2YHR136C 447 nt5.41□□□□□ -1.54
UBP3Q01477 PCL7YIL050W 858 nt5.41□□□□□ -1.54
UBP3Q01477 BUB3YOR026W 1026 nt5.41□□□□□ -1.54
UBP3Q01477 ATG5YPL149W 885 nt5.41□□□□□ -1.54
UBP3Q01477 SWC3YAL011W 1878 nt5.41□□□□□ -1.54 RIP-Chip
UBP3Q01477 PUS1YPL212C 1635 nt5.41□□□□□ -1.54
UBP3Q01477 NNK1YKL171W 2787 nt5.4□□□□□ -1.54
UBP3Q01477 MEF1YLR069C 2286 nt5.4□□□□□ -1.54
UBP3Q01477 SLT2YHR030C 1455 nt5.4□□□□□ -1.54
UBP3Q01477 FRE1YLR214W 2061 nt5.4□□□□□ -1.54
UBP3Q01477 MIG1YGL035C 1515 nt5.4□□□□□ -1.54
UBP3Q01477 YCR007CYCR007C 720 nt5.4□□□□□ -1.54
UBP3Q01477 YDR203WYDR203W 318 nt5.4□□□□□ -1.54
UBP3Q01477 FCF1YDR339C 570 nt5.4□□□□□ -1.54
UBP3Q01477 PRE9YGR135W 777 nt5.4□□□□□ -1.54
UBP3Q01477 PRS3YHL011C 963 nt5.4□□□□□ -1.54
UBP3Q01477 SAE3YHR079C-A 276 nt5.4□□□□□ -1.54
UBP3Q01477 BUD28YLR062C 378 nt5.4□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 107.7 ms