Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC13.78□□□□□ -0.2
HSPG2P98160 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HSPG2P98160 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HSPG2P98160 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HSPG2P98160 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HSPG2P98160 AC093787.1-201ENST00000450396 207 ntBASIC13.78□□□□□ -0.2
HSPG2P98160 RPS2P4-201ENST00000476944 856 ntBASIC13.78□□□□□ -0.2
HSPG2P98160 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.78□□□□□ -0.2
HSPG2P98160 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HSPG2P98160 AL445228.2-201ENST00000605589 952 ntBASIC13.78□□□□□ -0.2
HSPG2P98160 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC13.77□□□□□ -0.2
HSPG2P98160 ALDH1A3-203ENST00000557963 1670 ntBASIC13.77□□□□□ -0.2
HSPG2P98160 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HSPG2P98160 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
HSPG2P98160 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.77□□□□□ -0.2
HSPG2P98160 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HSPG2P98160 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HSPG2P98160 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
HSPG2P98160 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.77□□□□□ -0.2
HSPG2P98160 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.77□□□□□ -0.2
HSPG2P98160 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HSPG2P98160 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.77□□□□□ -0.21
HSPG2P98160 AC142381.4-202ENST00000563973 229 ntBASIC13.77□□□□□ -0.21
HSPG2P98160 MIR4758-201ENST00000577688 71 ntBASIC13.77□□□□□ -0.21
HSPG2P98160 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.77□□□□□ -0.21
HSPG2P98160 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HSPG2P98160 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HSPG2P98160 AC092803.2-201ENST00000564287 1899 ntBASIC13.77□□□□□ -0.21
HSPG2P98160 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HSPG2P98160 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HSPG2P98160 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HSPG2P98160 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HSPG2P98160 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HSPG2P98160 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.76□□□□□ -0.21
HSPG2P98160 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HSPG2P98160 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HSPG2P98160 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HSPG2P98160 RCN1P1-201ENST00000400413 996 ntBASIC13.76□□□□□ -0.21
HSPG2P98160 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HSPG2P98160 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
HSPG2P98160 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HSPG2P98160 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HSPG2P98160 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HSPG2P98160 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HSPG2P98160 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.76□□□□□ -0.21
HSPG2P98160 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.76□□□□□ -0.21
HSPG2P98160 AC144652.1-201ENST00000609974 1624 ntBASIC13.76□□□□□ -0.21
HSPG2P98160 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.76□□□□□ -0.21
HSPG2P98160 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.76□□□□□ -0.21
HSPG2P98160 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.76□□□□□ -0.21
HSPG2P98160 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HSPG2P98160 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.76□□□□□ -0.21
HSPG2P98160 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HSPG2P98160 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HSPG2P98160 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HSPG2P98160 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HSPG2P98160 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
HSPG2P98160 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 AC068338.2-201ENST00000563278 1430 ntBASIC13.75□□□□□ -0.21
HSPG2P98160 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC13.75□□□□□ -0.21
HSPG2P98160 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HSPG2P98160 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.75□□□□□ -0.21
HSPG2P98160 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.75□□□□□ -0.21
HSPG2P98160 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.75□□□□□ -0.21
HSPG2P98160 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC13.75□□□□□ -0.21
HSPG2P98160 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.75□□□□□ -0.21
HSPG2P98160 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HSPG2P98160 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HSPG2P98160 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HSPG2P98160 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC13.74□□□□□ -0.21
HSPG2P98160 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HSPG2P98160 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC13.74□□□□□ -0.21
HSPG2P98160 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HSPG2P98160 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.74□□□□□ -0.21
HSPG2P98160 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.74□□□□□ -0.21
HSPG2P98160 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.74□□□□□ -0.21
HSPG2P98160 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.74□□□□□ -0.21
HSPG2P98160 BX088651.1-201ENST00000540551 451 ntBASIC13.74□□□□□ -0.21
HSPG2P98160 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.74□□□□□ -0.21
HSPG2P98160 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HSPG2P98160 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC13.74□□□□□ -0.21
HSPG2P98160 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.74□□□□□ -0.21
HSPG2P98160 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.74□□□□□ -0.21
HSPG2P98160 MYCNOS-205ENST00000641950 531 ntBASIC13.74□□□□□ -0.21
HSPG2P98160 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HSPG2P98160 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HSPG2P98160 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.74□□□□□ -0.21
HSPG2P98160 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC13.74□□□□□ -0.21
HSPG2P98160 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HSPG2P98160 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HSPG2P98160 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.74□□□□□ -0.21
HSPG2P98160 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms