Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIRPAP78324 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIRPAP78324 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SIRPAP78324 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.85■□□□□ 0.77
SIRPAP78324 AC242852.2-201ENST00000615738 1807 ntBASIC19.85■□□□□ 0.77
SIRPAP78324 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SIRPAP78324 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SIRPAP78324 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SIRPAP78324 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.85■□□□□ 0.77
SIRPAP78324 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SIRPAP78324 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 AC091305.1-201ENST00000479476 895 ntBASIC19.84■□□□□ 0.77
SIRPAP78324 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.84■□□□□ 0.77
SIRPAP78324 AC027682.1-201ENST00000562846 899 ntBASIC19.84■□□□□ 0.77
SIRPAP78324 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.84■□□□□ 0.77
SIRPAP78324 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.84■□□□□ 0.77
SIRPAP78324 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SIRPAP78324 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.84■□□□□ 0.77
SIRPAP78324 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.84■□□□□ 0.77
SIRPAP78324 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SIRPAP78324 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.83■□□□□ 0.77
SIRPAP78324 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIRPAP78324 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIRPAP78324 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIRPAP78324 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIRPAP78324 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SIRPAP78324 AC099791.1-201ENST00000416440 715 ntBASIC19.83■□□□□ 0.77
SIRPAP78324 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SIRPAP78324 CA15P2-201ENST00000611168 834 ntBASIC19.83■□□□□ 0.77
SIRPAP78324 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.83■□□□□ 0.77
SIRPAP78324 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIRPAP78324 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SIRPAP78324 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SIRPAP78324 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SIRPAP78324 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.82■□□□□ 0.76
SIRPAP78324 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SIRPAP78324 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.82■□□□□ 0.76
SIRPAP78324 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SIRPAP78324 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.82■□□□□ 0.76
SIRPAP78324 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.82■□□□□ 0.76
SIRPAP78324 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.82■□□□□ 0.76
SIRPAP78324 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SIRPAP78324 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SIRPAP78324 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SIRPAP78324 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.81■□□□□ 0.76
SIRPAP78324 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SIRPAP78324 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 AC144652.1-201ENST00000609974 1624 ntBASIC19.81■□□□□ 0.76
SIRPAP78324 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SIRPAP78324 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.81■□□□□ 0.76
SIRPAP78324 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.81■□□□□ 0.76
SIRPAP78324 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.81■□□□□ 0.76
SIRPAP78324 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 RASA4CP-201ENST00000424092 1398 ntBASIC19.81■□□□□ 0.76
SIRPAP78324 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.81■□□□□ 0.76
SIRPAP78324 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SIRPAP78324 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIRPAP78324 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.8■□□□□ 0.76
SIRPAP78324 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIRPAP78324 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.8■□□□□ 0.76
SIRPAP78324 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.8■□□□□ 0.76
SIRPAP78324 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.8■□□□□ 0.76
SIRPAP78324 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.8■□□□□ 0.76
SIRPAP78324 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SIRPAP78324 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.8■□□□□ 0.76
SIRPAP78324 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIRPAP78324 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SIRPAP78324 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.8■□□□□ 0.76
SIRPAP78324 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIRPAP78324 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIRPAP78324 AC079630.1-202ENST00000618127 1840 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms