Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RPS4XP62701 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RPS4XP62701 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.75■□□□□ 0.75
RPS4XP62701 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4XP62701 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS4XP62701 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS4XP62701 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4XP62701 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4XP62701 UNC93B3-201ENST00000308076 687 ntBASIC19.74■□□□□ 0.75
RPS4XP62701 AC142381.2-201ENST00000566120 298 ntBASIC19.74■□□□□ 0.75
RPS4XP62701 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4XP62701 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4XP62701 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
RPS4XP62701 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.74■□□□□ 0.75
RPS4XP62701 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RPS4XP62701 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.73■□□□□ 0.75
RPS4XP62701 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RPS4XP62701 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RPS4XP62701 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.73■□□□□ 0.75
RPS4XP62701 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.73■□□□□ 0.75
RPS4XP62701 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4XP62701 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS4XP62701 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RPS4XP62701 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
RPS4XP62701 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4XP62701 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS4XP62701 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4XP62701 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.73■□□□□ 0.75
RPS4XP62701 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4XP62701 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RPS4XP62701 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.72■□□□□ 0.75
RPS4XP62701 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPS4XP62701 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.72■□□□□ 0.75
RPS4XP62701 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 AL136162.1-201ENST00000607711 1078 ntBASIC19.72■□□□□ 0.75
RPS4XP62701 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RPS4XP62701 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RPS4XP62701 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.72■□□□□ 0.75
RPS4XP62701 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RPS4XP62701 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.71■□□□□ 0.75
RPS4XP62701 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.71■□□□□ 0.75
RPS4XP62701 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RPS4XP62701 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.71■□□□□ 0.75
RPS4XP62701 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.71■□□□□ 0.75
RPS4XP62701 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RPS4XP62701 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
RPS4XP62701 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.7■□□□□ 0.74
RPS4XP62701 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.7■□□□□ 0.74
RPS4XP62701 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
RPS4XP62701 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RPS4XP62701 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.7■□□□□ 0.74
RPS4XP62701 AC135279.3-201ENST00000610945 1311 ntBASIC19.7■□□□□ 0.74
RPS4XP62701 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.7■□□□□ 0.74
RPS4XP62701 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RPS4XP62701 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.7■□□□□ 0.74
RPS4XP62701 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS4XP62701 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4XP62701 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4XP62701 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4XP62701 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RPS4XP62701 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4XP62701 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS4XP62701 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4XP62701 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4XP62701 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.69■□□□□ 0.74
RPS4XP62701 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RPS4XP62701 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RPS4XP62701 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RPS4XP62701 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
RPS4XP62701 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4XP62701 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
RPS4XP62701 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RPS4XP62701 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms