Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCR4P61073 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.87■□□□□ 0.77
CXCR4P61073 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCR4P61073 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCR4P61073 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CXCR4P61073 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.86■□□□□ 0.77
CXCR4P61073 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.86■□□□□ 0.77
CXCR4P61073 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.86■□□□□ 0.77
CXCR4P61073 MIR4281-201ENST00000580852 62 ntBASIC19.86■□□□□ 0.77
CXCR4P61073 THA1P-201ENST00000590384 1145 ntBASIC19.86■□□□□ 0.77
CXCR4P61073 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCR4P61073 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CXCR4P61073 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.86■□□□□ 0.77
CXCR4P61073 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCR4P61073 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CXCR4P61073 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCR4P61073 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
CXCR4P61073 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCR4P61073 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.85■□□□□ 0.77
CXCR4P61073 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCR4P61073 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCR4P61073 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCR4P61073 KRT18P24-201ENST00000344739 1156 ntBASIC19.85■□□□□ 0.77
CXCR4P61073 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CXCR4P61073 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CXCR4P61073 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCR4P61073 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCR4P61073 Z98882.1-201ENST00000622160 2253 ntBASIC19.85■□□□□ 0.77
CXCR4P61073 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.84■□□□□ 0.77
CXCR4P61073 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.84■□□□□ 0.77
CXCR4P61073 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.84■□□□□ 0.77
CXCR4P61073 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.84■□□□□ 0.77
CXCR4P61073 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CXCR4P61073 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CXCR4P61073 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.84■□□□□ 0.77
CXCR4P61073 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CXCR4P61073 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CXCR4P61073 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.84■□□□□ 0.77
CXCR4P61073 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.83■□□□□ 0.77
CXCR4P61073 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CXCR4P61073 FEM1AP4-201ENST00000443167 1987 ntBASIC19.83■□□□□ 0.77
CXCR4P61073 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CXCR4P61073 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CXCR4P61073 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CXCR4P61073 AC004448.1-201ENST00000458332 883 ntBASIC19.83■□□□□ 0.77
CXCR4P61073 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.83■□□□□ 0.77
CXCR4P61073 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.83■□□□□ 0.77
CXCR4P61073 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.83■□□□□ 0.76
CXCR4P61073 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CXCR4P61073 LINC01960-201ENST00000563759 1884 ntBASIC19.83■□□□□ 0.76
CXCR4P61073 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CXCR4P61073 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CXCR4P61073 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CXCR4P61073 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.82■□□□□ 0.76
CXCR4P61073 AC074183.2-201ENST00000623112 922 ntBASIC19.82■□□□□ 0.76
CXCR4P61073 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.82■□□□□ 0.76
CXCR4P61073 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CXCR4P61073 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCR4P61073 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CXCR4P61073 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CXCR4P61073 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CXCR4P61073 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCR4P61073 AL157384.1-201ENST00000445995 2473 ntBASIC19.81■□□□□ 0.76
CXCR4P61073 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCR4P61073 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CXCR4P61073 PVT1_1.1-201ENST00000615125 194 ntBASIC19.81■□□□□ 0.76
CXCR4P61073 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CXCR4P61073 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CXCR4P61073 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.81■□□□□ 0.76
CXCR4P61073 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms