Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN20P56880 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN20P56880 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.97■□□□□ 0.79
CLDN20P56880 AP001330.3-201ENST00000520123 633 ntBASIC19.97■□□□□ 0.79
CLDN20P56880 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN20P56880 AF213884.3-201ENST00000563833 479 ntBASIC19.97■□□□□ 0.79
CLDN20P56880 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.97■□□□□ 0.79
CLDN20P56880 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN20P56880 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLDN20P56880 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN20P56880 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN20P56880 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN20P56880 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN20P56880 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN20P56880 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.96■□□□□ 0.79
CLDN20P56880 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLDN20P56880 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CLDN20P56880 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN20P56880 SLC25A24-204ENST00000569674 2357 ntBASIC19.96■□□□□ 0.79
CLDN20P56880 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLDN20P56880 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN20P56880 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.96■□□□□ 0.79
CLDN20P56880 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLDN20P56880 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN20P56880 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN20P56880 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLDN20P56880 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN20P56880 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CLDN20P56880 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN20P56880 MIR939-201ENST00000401314 82 ntBASIC19.95■□□□□ 0.78
CLDN20P56880 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.95■□□□□ 0.78
CLDN20P56880 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CLDN20P56880 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.95■□□□□ 0.78
CLDN20P56880 AC008764.7-201ENST00000593779 1081 ntBASIC19.95■□□□□ 0.78
CLDN20P56880 AL136967.2-201ENST00000623968 743 ntBASIC19.95■□□□□ 0.78
CLDN20P56880 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN20P56880 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLDN20P56880 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN20P56880 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN20P56880 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN20P56880 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN20P56880 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLDN20P56880 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.94■□□□□ 0.78
CLDN20P56880 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN20P56880 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CLDN20P56880 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN20P56880 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN20P56880 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.94■□□□□ 0.78
CLDN20P56880 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLDN20P56880 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CLDN20P56880 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
CLDN20P56880 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN20P56880 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CLDN20P56880 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN20P56880 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.93■□□□□ 0.78
CLDN20P56880 AC004687.1-201ENST00000579003 1625 ntBASIC19.93■□□□□ 0.78
CLDN20P56880 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CLDN20P56880 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN20P56880 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN20P56880 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN20P56880 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLDN20P56880 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.93■□□□□ 0.78
CLDN20P56880 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.93■□□□□ 0.78
CLDN20P56880 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN20P56880 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN20P56880 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.92■□□□□ 0.78
CLDN20P56880 GUSBP5-202ENST00000510805 1989 ntBASIC19.92■□□□□ 0.78
CLDN20P56880 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.92■□□□□ 0.78
CLDN20P56880 SLC47A1P1-202ENST00000449666 945 ntBASIC19.92■□□□□ 0.78
CLDN20P56880 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLDN20P56880 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN20P56880 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.91■□□□□ 0.78
CLDN20P56880 ECEL1P1-201ENST00000373592 1742 ntBASIC19.91■□□□□ 0.78
CLDN20P56880 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN20P56880 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN20P56880 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.91■□□□□ 0.78
CLDN20P56880 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN20P56880 AC099791.1-201ENST00000416440 715 ntBASIC19.91■□□□□ 0.78
CLDN20P56880 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN20P56880 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN20P56880 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN20P56880 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLDN20P56880 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLDN20P56880 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CLDN20P56880 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN20P56880 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN20P56880 BX842568.3-201ENST00000418104 571 ntBASIC19.9■□□□□ 0.78
CLDN20P56880 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN20P56880 AC091305.1-201ENST00000479476 895 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms