Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CLDN6P56747 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.06■□□□□ 0.96
CLDN6P56747 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.06■□□□□ 0.96
CLDN6P56747 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.06■□□□□ 0.96
CLDN6P56747 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.06■□□□□ 0.96
CLDN6P56747 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.06■□□□□ 0.96
CLDN6P56747 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CLDN6P56747 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLDN6P56747 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLDN6P56747 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.05■□□□□ 0.96
CLDN6P56747 AC079140.4-201ENST00000507448 529 ntBASIC21.05■□□□□ 0.96
CLDN6P56747 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CLDN6P56747 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.05■□□□□ 0.96
CLDN6P56747 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLDN6P56747 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 AC079630.1-202ENST00000618127 1840 ntBASIC21.04■□□□□ 0.96
CLDN6P56747 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CLDN6P56747 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CLDN6P56747 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLDN6P56747 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CLDN6P56747 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLDN6P56747 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN6P56747 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLDN6P56747 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.03■□□□□ 0.96
CLDN6P56747 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CLDN6P56747 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.03■□□□□ 0.96
CLDN6P56747 MIR4651-201ENST00000582622 73 ntBASIC21.03■□□□□ 0.96
CLDN6P56747 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.03■□□□□ 0.96
CLDN6P56747 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN6P56747 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN6P56747 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN6P56747 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN6P56747 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLDN6P56747 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.02■□□□□ 0.96
CLDN6P56747 AL138781.1-201ENST00000566567 1274 ntBASIC21.02■□□□□ 0.96
CLDN6P56747 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.02■□□□□ 0.96
CLDN6P56747 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN6P56747 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN6P56747 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CLDN6P56747 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN6P56747 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN6P56747 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN6P56747 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN6P56747 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN6P56747 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN6P56747 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN6P56747 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.01■□□□□ 0.95
CLDN6P56747 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN6P56747 AC083906.2-201ENST00000511578 360 ntBASIC21.01■□□□□ 0.95
CLDN6P56747 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN6P56747 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.01■□□□□ 0.95
CLDN6P56747 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.01■□□□□ 0.95
CLDN6P56747 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN6P56747 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.01■□□□□ 0.95
CLDN6P56747 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLDN6P56747 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN6P56747 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN6P56747 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLDN6P56747 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN6P56747 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21■□□□□ 0.95
CLDN6P56747 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN6P56747 AC010141.3-201ENST00000456659 717 ntBASIC21■□□□□ 0.95
CLDN6P56747 AC142086.2-201ENST00000569753 217 ntBASIC21■□□□□ 0.95
CLDN6P56747 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLDN6P56747 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLDN6P56747 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLDN6P56747 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN6P56747 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN6P56747 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN6P56747 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN6P56747 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN6P56747 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CLDN6P56747 KRT18P11-201ENST00000435214 1283 ntBASIC20.99■□□□□ 0.95
CLDN6P56747 GUSBP6-202ENST00000438529 1198 ntBASIC20.99■□□□□ 0.95
CLDN6P56747 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN6P56747 AC104187.1-201ENST00000607510 612 ntBASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms