Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.59■■□□□ 1.05
CLNS1AP54105 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.59■■□□□ 1.05
CLNS1AP54105 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CLNS1AP54105 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLNS1AP54105 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLNS1AP54105 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLNS1AP54105 FBXW4P1-201ENST00000426721 2239 ntBASIC21.58■■□□□ 1.05
CLNS1AP54105 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.58■■□□□ 1.05
CLNS1AP54105 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.58■■□□□ 1.05
CLNS1AP54105 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLNS1AP54105 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.58■■□□□ 1.05
CLNS1AP54105 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
CLNS1AP54105 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.04
CLNS1AP54105 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLNS1AP54105 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLNS1AP54105 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLNS1AP54105 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLNS1AP54105 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLNS1AP54105 AC120024.1-201ENST00000562672 995 ntBASIC21.57■■□□□ 1.04
CLNS1AP54105 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.57■■□□□ 1.04
CLNS1AP54105 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CLNS1AP54105 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.57■■□□□ 1.04
CLNS1AP54105 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CLNS1AP54105 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLNS1AP54105 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.56■■□□□ 1.04
CLNS1AP54105 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CLNS1AP54105 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CLNS1AP54105 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CLNS1AP54105 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.56■■□□□ 1.04
CLNS1AP54105 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 AC074183.2-201ENST00000623112 922 ntBASIC21.56■■□□□ 1.04
CLNS1AP54105 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLNS1AP54105 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.55■■□□□ 1.04
CLNS1AP54105 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.55■■□□□ 1.04
CLNS1AP54105 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.55■■□□□ 1.04
CLNS1AP54105 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.55■■□□□ 1.04
CLNS1AP54105 BHLHE23-202ENST00000612929 1109 ntBASIC21.55■■□□□ 1.04
CLNS1AP54105 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CLNS1AP54105 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLNS1AP54105 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CLNS1AP54105 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CLNS1AP54105 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLNS1AP54105 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLNS1AP54105 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.54■■□□□ 1.04
CLNS1AP54105 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
CLNS1AP54105 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.54■■□□□ 1.04
CLNS1AP54105 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.54■■□□□ 1.04
CLNS1AP54105 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.54■■□□□ 1.04
CLNS1AP54105 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CLNS1AP54105 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.54■■□□□ 1.04
CLNS1AP54105 AC026310.3-201ENST00000625186 2373 ntBASIC21.54■■□□□ 1.04
CLNS1AP54105 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CLNS1AP54105 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.53■■□□□ 1.04
CLNS1AP54105 KRT18P24-201ENST00000344739 1156 ntBASIC21.53■■□□□ 1.04
CLNS1AP54105 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CLNS1AP54105 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.53■■□□□ 1.04
CLNS1AP54105 THA1P-201ENST00000590384 1145 ntBASIC21.53■■□□□ 1.04
CLNS1AP54105 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.53■■□□□ 1.04
CLNS1AP54105 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLNS1AP54105 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLNS1AP54105 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.52■■□□□ 1.04
CLNS1AP54105 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CLNS1AP54105 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLNS1AP54105 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLNS1AP54105 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLNS1AP54105 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CLNS1AP54105 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLNS1AP54105 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.51■■□□□ 1.03
CLNS1AP54105 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms