Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 CDA2YLR308W 939 nt3.36□□□□□ -1.87
UFD1P53044 YBL036CYBL036C 774 nt3.36□□□□□ -1.87
UFD1P53044 YNR068CYNR068C 819 nt3.36□□□□□ -1.87
UFD1P53044 INA17YPL099C 549 nt3.36□□□□□ -1.87
UFD1P53044 FES1YBR101C 873 nt3.36□□□□□ -1.87
UFD1P53044 NUP159YIL115C 4383 nt3.36□□□□□ -1.87
UFD1P53044 ZDS1YMR273C 2748 nt3.35□□□□□ -1.87
UFD1P53044 YDR282CYDR282C 1245 nt3.35□□□□□ -1.87
UFD1P53044 MCM21YDR318W 1107 nt3.35□□□□□ -1.87
UFD1P53044 RPB7YDR404C 516 nt3.35□□□□□ -1.87
UFD1P53044 BUD16YEL029C 939 nt3.35□□□□□ -1.87
UFD1P53044 YGL101WYGL101W 648 nt3.35□□□□□ -1.87
UFD1P53044 TTI2YJR136C 1266 nt3.35□□□□□ -1.87
UFD1P53044 CPR3YML078W 549 nt3.35□□□□□ -1.87
UFD1P53044 RNA1YMR235C 1224 nt3.35□□□□□ -1.87
UFD1P53044 HRT1YOL133W 366 nt3.35□□□□□ -1.87
UFD1P53044 IDH2YOR136W 1110 nt3.35□□□□□ -1.87
UFD1P53044 SNF8YPL002C 702 nt3.35□□□□□ -1.87
UFD1P53044 MIH1YMR036C 1665 nt3.35□□□□□ -1.87
UFD1P53044 FBP26YJL155C 1359 nt3.35□□□□□ -1.87
UFD1P53044 YGR126WYGR126W 693 nt3.34□□□□□ -1.87
UFD1P53044 JLP1YLL057C 1239 nt3.34□□□□□ -1.87
UFD1P53044 ARG80YMR042W 534 nt3.34□□□□□ -1.87
UFD1P53044 IBD2YNL164C 1056 nt3.34□□□□□ -1.87
UFD1P53044 VPS28YPL065W 729 nt3.34□□□□□ -1.87
UFD1P53044 FDH2YPL275W 711 nt3.34□□□□□ -1.87
UFD1P53044 ARO80YDR421W 2853 nt3.34□□□□□ -1.87
UFD1P53044 ALG11YNL048W 1647 nt3.33□□□□□ -1.88
UFD1P53044 RKM3YBR030W 1659 nt3.33□□□□□ -1.88
UFD1P53044 MED2YDL005C 1296 nt3.33□□□□□ -1.88
UFD1P53044 YDR431WYDR431W 312 nt3.33□□□□□ -1.88
UFD1P53044 YHR032C-AYHR032C-A 120 nt3.33□□□□□ -1.88
UFD1P53044 AIR1YIL079C 1083 nt3.33□□□□□ -1.88
UFD1P53044 REX3YLR107W 1215 nt3.33□□□□□ -1.88
UFD1P53044 YAR1YPL239W 603 nt3.33□□□□□ -1.88
UFD1P53044 GCN5YGR252W 1320 nt3.33□□□□□ -1.88
UFD1P53044 PEX1YKL197C 3132 nt3.33□□□□□ -1.88
UFD1P53044 PMT6YGR199W 2280 nt3.33□□□□□ -1.88
UFD1P53044 SRS2YJL092W 3525 nt3.33□□□□□ -1.88
UFD1P53044 FAR8YMR029C 1572 nt3.33□□□□□ -1.88
UFD1P53044 STV1YMR054W 2673 nt3.33□□□□□ -1.88
UFD1P53044 RAD7YJR052W 1698 nt3.33□□□□□ -1.88
UFD1P53044 PRP22YER013W 3438 nt3.32□□□□□ -1.88
UFD1P53044 USA1YML029W 2517 nt3.32□□□□□ -1.88
UFD1P53044 AHA1YDR214W 1053 nt3.32□□□□□ -1.88
UFD1P53044 DUO1YGL061C 744 nt3.32□□□□□ -1.88
UFD1P53044 YHB1YGR234W 1200 nt3.32□□□□□ -1.88
UFD1P53044 YHR214C-EYHR214C-E 300 nt3.32□□□□□ -1.88
UFD1P53044 YIL089WYIL089W 618 nt3.32□□□□□ -1.88
UFD1P53044 SOD1YJR104C 465 nt3.32□□□□□ -1.88
UFD1P53044 MRP8YKL142W 660 nt3.32□□□□□ -1.88
UFD1P53044 YLR225CYLR225C 1224 nt3.32□□□□□ -1.88
UFD1P53044 YAR070CYAR070C 300 nt3.32□□□□□ -1.88
UFD1P53044 ECM16YMR128W 3804 nt3.32□□□□□ -1.88
UFD1P53044 YBL077WYBL077W 432 nt3.32□□□□□ -1.88
UFD1P53044 RET3YPL010W 570 nt3.32□□□□□ -1.88
UFD1P53044 RPL19AYBR084C-A 570 nt3.32□□□□□ -1.88
UFD1P53044 IOC4YMR044W 1428 nt3.32□□□□□ -1.88
UFD1P53044 NAM9YNL137C 1461 nt3.32□□□□□ -1.88
UFD1P53044 BYE1YKL005C 1785 nt3.32□□□□□ -1.88
UFD1P53044 SYF1YDR416W 2580 nt3.32□□□□□ -1.88
UFD1P53044 APE2YKL157W 2859 nt3.31□□□□□ -1.88
UFD1P53044 YOR022CYOR022C 2148 nt3.31□□□□□ -1.88
UFD1P53044 ELM1YKL048C 1923 nt3.31□□□□□ -1.88
UFD1P53044 HOM2YDR158W 1098 nt3.31□□□□□ -1.88
UFD1P53044 YKL162C-AYKL162C-A 153 nt3.31□□□□□ -1.88
UFD1P53044 YPL088WYPL088W 1029 nt3.31□□□□□ -1.88
UFD1P53044 POS5YPL188W 1245 nt3.31□□□□□ -1.88
UFD1P53044 CNS1YBR155W 1158 nt3.31□□□□□ -1.88
UFD1P53044 KIN4YOR233W 2403 nt3.31□□□□□ -1.88
UFD1P53044 BCH2YKR027W 2298 nt3.31□□□□□ -1.88
UFD1P53044 MDM38YOL027C 1722 nt3.3□□□□□ -1.88
UFD1P53044 SPA2YLL021W 4401 nt3.3□□□□□ -1.88
UFD1P53044 TYR1YBR166C 1359 nt3.3□□□□□ -1.88
UFD1P53044 YGL074CYGL074C 327 nt3.3□□□□□ -1.88
UFD1P53044 MSN4YKL062W 1893 nt3.3□□□□□ -1.88
UFD1P53044 ARX1YDR101C 1782 nt3.3□□□□□ -1.88
UFD1P53044 SPT16YGL207W 3108 nt3.3□□□□□ -1.88
UFD1P53044 SYT1YPR095C 3681 nt3.3□□□□□ -1.88
UFD1P53044 SEA4YBL104C 3117 nt3.29□□□□□ -1.88
UFD1P53044 VFA1YER128W 612 nt3.29□□□□□ -1.88
UFD1P53044 SEC53YFL045C 765 nt3.29□□□□□ -1.88
UFD1P53044 CDC12YHR107C 1224 nt3.29□□□□□ -1.88
UFD1P53044 PIR3YKL163W 978 nt3.29□□□□□ -1.88
UFD1P53044 MMM1YLL006W 1281 nt3.29□□□□□ -1.88
UFD1P53044 YLR428CYLR428C 345 nt3.29□□□□□ -1.88
UFD1P53044 GLO4YOR040W 858 nt3.29□□□□□ -1.88
UFD1P53044 SHE3YBR130C 1278 nt3.29□□□□□ -1.88
UFD1P53044 SUC2YIL162W 1599 nt3.29□□□□□ -1.88
UFD1P53044 FAT1YBR041W 2010 nt3.29□□□□□ -1.88
UFD1P53044 URA2YJL130C 6645 nt3.29□□□□□ -1.88
UFD1P53044 KAP95YLR347C 2586 nt3.28□□□□□ -1.88
UFD1P53044 ROD1YOR018W 2514 nt3.28□□□□□ -1.88
UFD1P53044 PUF2YPR042C 3228 nt3.28□□□□□ -1.88
UFD1P53044 ABD1YBR236C 1311 nt3.28□□□□□ -1.88
UFD1P53044 YMR1YJR110W 2067 nt3.28□□□□□ -1.88
UFD1P53044 BUD27YFL023W 2391 nt3.28□□□□□ -1.88
UFD1P53044 IRC22YEL001C 678 nt3.28□□□□□ -1.88
UFD1P53044 SFH5YJL145W 885 nt3.28□□□□□ -1.88
UFD1P53044 ATG8YBL078C 354 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 47.8 ms