Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA2P52926 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
HMGA2P52926 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA2P52926 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA2P52926 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGA2P52926 AC005229.4-201ENST00000610085 2198 ntBASIC19.97■□□□□ 0.79
HMGA2P52926 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA2P52926 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA2P52926 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA2P52926 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGA2P52926 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.97■□□□□ 0.79
HMGA2P52926 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA2P52926 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA2P52926 AL031848.2-201ENST00000607670 837 ntBASIC19.97■□□□□ 0.79
HMGA2P52926 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
HMGA2P52926 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HMGA2P52926 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
HMGA2P52926 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.97■□□□□ 0.79
HMGA2P52926 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGA2P52926 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HMGA2P52926 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA2P52926 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA2P52926 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.96■□□□□ 0.79
HMGA2P52926 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.96■□□□□ 0.79
HMGA2P52926 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HMGA2P52926 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
HMGA2P52926 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HMGA2P52926 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HMGA2P52926 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGA2P52926 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGA2P52926 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HMGA2P52926 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.95■□□□□ 0.78
HMGA2P52926 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HMGA2P52926 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
HMGA2P52926 KRT8P33-201ENST00000508125 1423 ntBASIC19.94■□□□□ 0.78
HMGA2P52926 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGA2P52926 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGA2P52926 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGA2P52926 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.94■□□□□ 0.78
HMGA2P52926 AL033527.3-201ENST00000566366 1196 ntBASIC19.94■□□□□ 0.78
HMGA2P52926 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGA2P52926 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HMGA2P52926 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGA2P52926 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.93■□□□□ 0.78
HMGA2P52926 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGA2P52926 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HMGA2P52926 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HMGA2P52926 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGA2P52926 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HMGA2P52926 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGA2P52926 AL499627.2-201ENST00000606283 725 ntBASIC19.93■□□□□ 0.78
HMGA2P52926 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.93■□□□□ 0.78
HMGA2P52926 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HMGA2P52926 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 C17orf82-201ENST00000623772 1530 ntBASIC19.92■□□□□ 0.78
HMGA2P52926 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
HMGA2P52926 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGA2P52926 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HMGA2P52926 BX664725.1-201ENST00000438252 379 ntBASIC19.92■□□□□ 0.78
HMGA2P52926 AC092028.1-203ENST00000608262 953 ntBASIC19.92■□□□□ 0.78
HMGA2P52926 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.92■□□□□ 0.78
HMGA2P52926 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.92■□□□□ 0.78
HMGA2P52926 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HMGA2P52926 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HMGA2P52926 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGA2P52926 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGA2P52926 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGA2P52926 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGA2P52926 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HMGA2P52926 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGA2P52926 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGA2P52926 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HMGA2P52926 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.91■□□□□ 0.78
HMGA2P52926 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HMGA2P52926 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.91■□□□□ 0.78
HMGA2P52926 Z98882.1-201ENST00000622160 2253 ntBASIC19.91■□□□□ 0.78
HMGA2P52926 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGA2P52926 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGA2P52926 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGA2P52926 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGA2P52926 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HMGA2P52926 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HMGA2P52926 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.9■□□□□ 0.78
HMGA2P52926 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGA2P52926 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms