Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.35■□□□□ 0.85
SMSP52788 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.35■□□□□ 0.85
SMSP52788 AC079630.1-202ENST00000618127 1840 ntBASIC20.35■□□□□ 0.85
SMSP52788 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 IRS3P-201ENST00000223076 1006 ntBASIC20.35■□□□□ 0.85
SMSP52788 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.35■□□□□ 0.85
SMSP52788 AC099791.2-201ENST00000605725 427 ntBASIC20.35■□□□□ 0.85
SMSP52788 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.35■□□□□ 0.85
SMSP52788 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SMSP52788 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMSP52788 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMSP52788 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMSP52788 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.34■□□□□ 0.85
SMSP52788 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.34■□□□□ 0.85
SMSP52788 AC008764.7-201ENST00000593779 1081 ntBASIC20.34■□□□□ 0.85
SMSP52788 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.34■□□□□ 0.85
SMSP52788 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMSP52788 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMSP52788 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMSP52788 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMSP52788 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMSP52788 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMSP52788 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMSP52788 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMSP52788 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SMSP52788 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMSP52788 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.33■□□□□ 0.85
SMSP52788 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.33■□□□□ 0.85
SMSP52788 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.33■□□□□ 0.85
SMSP52788 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.33■□□□□ 0.85
SMSP52788 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMSP52788 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.33■□□□□ 0.84
SMSP52788 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMSP52788 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.33■□□□□ 0.84
SMSP52788 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.33■□□□□ 0.84
SMSP52788 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.33■□□□□ 0.84
SMSP52788 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
SMSP52788 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.32■□□□□ 0.84
SMSP52788 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 AL162430.1-201ENST00000480705 870 ntBASIC20.32■□□□□ 0.84
SMSP52788 AC087623.3-201ENST00000607047 1098 ntBASIC20.32■□□□□ 0.84
SMSP52788 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMSP52788 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMSP52788 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMSP52788 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
SMSP52788 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMSP52788 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMSP52788 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMSP52788 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMSP52788 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMSP52788 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMSP52788 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMSP52788 AC241377.3-202ENST00000626088 1088 ntBASIC20.31■□□□□ 0.84
SMSP52788 AC241585.3-202ENST00000628937 1088 ntBASIC20.31■□□□□ 0.84
SMSP52788 AC245100.8-202ENST00000629247 1058 ntBASIC20.31■□□□□ 0.84
SMSP52788 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.31■□□□□ 0.84
SMSP52788 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.3■□□□□ 0.84
SMSP52788 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.3■□□□□ 0.84
SMSP52788 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.3■□□□□ 0.84
SMSP52788 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMSP52788 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.29■□□□□ 0.84
SMSP52788 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SMSP52788 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.29■□□□□ 0.84
SMSP52788 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMSP52788 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMSP52788 AC099791.1-201ENST00000416440 715 ntBASIC20.29■□□□□ 0.84
SMSP52788 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.29■□□□□ 0.84
SMSP52788 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms