Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 EP400NL-214ENST00000641289 2402 ntBASIC21.81■■□□□ 1.08
ZNF140P52738 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
ZNF140P52738 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
ZNF140P52738 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ZNF140P52738 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
ZNF140P52738 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.81■■□□□ 1.08
ZNF140P52738 PBX2P1-201ENST00000493219 1291 ntBASIC21.81■■□□□ 1.08
ZNF140P52738 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ZNF140P52738 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ZNF140P52738 LINC00526-201ENST00000581067 1875 ntBASIC21.81■■□□□ 1.08
ZNF140P52738 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZNF140P52738 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.8■■□□□ 1.08
ZNF140P52738 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.8■■□□□ 1.08
ZNF140P52738 BX842568.3-201ENST00000418104 571 ntBASIC21.8■■□□□ 1.08
ZNF140P52738 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.8■■□□□ 1.08
ZNF140P52738 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.8■■□□□ 1.08
ZNF140P52738 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.8■■□□□ 1.08
ZNF140P52738 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.8■■□□□ 1.08
ZNF140P52738 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
ZNF140P52738 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF140P52738 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.79■■□□□ 1.08
ZNF140P52738 AC079834.2-201ENST00000609776 1949 ntBASIC21.79■■□□□ 1.08
ZNF140P52738 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ZNF140P52738 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ZNF140P52738 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF140P52738 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.79■■□□□ 1.08
ZNF140P52738 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ZNF140P52738 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.79■■□□□ 1.08
ZNF140P52738 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
ZNF140P52738 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF140P52738 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZNF140P52738 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF140P52738 AP005435.1-201ENST00000529293 1178 ntBASIC21.78■■□□□ 1.08
ZNF140P52738 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.78■■□□□ 1.08
ZNF140P52738 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.78■■□□□ 1.08
ZNF140P52738 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.78■■□□□ 1.08
ZNF140P52738 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.78■■□□□ 1.08
ZNF140P52738 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF140P52738 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZNF140P52738 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.77■■□□□ 1.08
ZNF140P52738 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.77■■□□□ 1.08
ZNF140P52738 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.77■■□□□ 1.08
ZNF140P52738 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.77■■□□□ 1.08
ZNF140P52738 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.77■■□□□ 1.08
ZNF140P52738 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
ZNF140P52738 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.77■■□□□ 1.08
ZNF140P52738 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ZNF140P52738 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZNF140P52738 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZNF140P52738 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZNF140P52738 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.76■■□□□ 1.07
ZNF140P52738 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF140P52738 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF140P52738 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF140P52738 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF140P52738 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.76■■□□□ 1.07
ZNF140P52738 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.76■■□□□ 1.07
ZNF140P52738 AC010141.3-201ENST00000456659 717 ntBASIC21.76■■□□□ 1.07
ZNF140P52738 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ZNF140P52738 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.76■■□□□ 1.07
ZNF140P52738 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ZNF140P52738 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
ZNF140P52738 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF140P52738 AC233992.3-201ENST00000607491 485 ntBASIC21.76■■□□□ 1.07
ZNF140P52738 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.76■■□□□ 1.07
ZNF140P52738 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ZNF140P52738 AC087239.1-201ENST00000622671 572 ntBASIC21.76■■□□□ 1.07
ZNF140P52738 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.76■■□□□ 1.07
ZNF140P52738 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF140P52738 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZNF140P52738 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ZNF140P52738 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ZNF140P52738 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF140P52738 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF140P52738 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF140P52738 AP001330.3-201ENST00000520123 633 ntBASIC21.75■■□□□ 1.07
ZNF140P52738 AC079089.2-201ENST00000531211 1277 ntBASIC21.75■■□□□ 1.07
ZNF140P52738 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF140P52738 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms