Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CLCN2P51788 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLCN2P51788 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLCN2P51788 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN2P51788 AC092667.1-201ENST00000434301 2586 ntBASIC21.04■□□□□ 0.96
CLCN2P51788 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
CLCN2P51788 AC009102.2-201ENST00000606772 1639 ntBASIC21.04■□□□□ 0.96
CLCN2P51788 AC092053.2-201ENST00000640557 1818 ntBASIC21.04■□□□□ 0.96
CLCN2P51788 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN2P51788 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN2P51788 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN2P51788 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLCN2P51788 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.04■□□□□ 0.96
CLCN2P51788 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN2P51788 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN2P51788 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLCN2P51788 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.04■□□□□ 0.96
CLCN2P51788 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLCN2P51788 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN2P51788 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLCN2P51788 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN2P51788 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
CLCN2P51788 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CLCN2P51788 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
CLCN2P51788 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.03■□□□□ 0.96
CLCN2P51788 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CLCN2P51788 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLCN2P51788 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.03■□□□□ 0.96
CLCN2P51788 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN2P51788 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.02■□□□□ 0.96
CLCN2P51788 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.02■□□□□ 0.96
CLCN2P51788 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN2P51788 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLCN2P51788 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN2P51788 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CLCN2P51788 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN2P51788 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN2P51788 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.01■□□□□ 0.95
CLCN2P51788 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.01■□□□□ 0.95
CLCN2P51788 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLCN2P51788 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.01■□□□□ 0.95
CLCN2P51788 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLCN2P51788 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21■□□□□ 0.95
CLCN2P51788 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21■□□□□ 0.95
CLCN2P51788 AC092171.4-201ENST00000609130 632 ntBASIC21■□□□□ 0.95
CLCN2P51788 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLCN2P51788 RALB-208ENST00000631312 311 ntTSL 5 BASIC21■□□□□ 0.95
CLCN2P51788 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CLCN2P51788 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CLCN2P51788 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CLCN2P51788 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLCN2P51788 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.99■□□□□ 0.95
CLCN2P51788 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.99■□□□□ 0.95
CLCN2P51788 AL139246.5-201ENST00000606645 996 ntBASIC20.99■□□□□ 0.95
CLCN2P51788 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.99■□□□□ 0.95
CLCN2P51788 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.99■□□□□ 0.95
CLCN2P51788 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLCN2P51788 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLCN2P51788 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLCN2P51788 C17orf82-201ENST00000623772 1530 ntBASIC20.99■□□□□ 0.95
CLCN2P51788 FBXW4P1-201ENST00000426721 2239 ntBASIC20.98■□□□□ 0.95
CLCN2P51788 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLCN2P51788 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms