Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.42■■□□□ 1.5
CPT1AP50416 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CPT1AP50416 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CPT1AP50416 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CPT1AP50416 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.42■■□□□ 1.5
CPT1AP50416 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPT1AP50416 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.41■■□□□ 1.5
CPT1AP50416 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPT1AP50416 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CPT1AP50416 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CPT1AP50416 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPT1AP50416 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPT1AP50416 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.41■■□□□ 1.5
CPT1AP50416 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.41■■□□□ 1.5
CPT1AP50416 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CPT1AP50416 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CPT1AP50416 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CPT1AP50416 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.4■■□□□ 1.5
CPT1AP50416 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CPT1AP50416 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CPT1AP50416 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CPT1AP50416 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
CPT1AP50416 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.4■■□□□ 1.5
CPT1AP50416 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CPT1AP50416 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CPT1AP50416 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CPT1AP50416 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.39■■□□□ 1.5
CPT1AP50416 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.39■■□□□ 1.49
CPT1AP50416 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPT1AP50416 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.39■■□□□ 1.49
CPT1AP50416 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.39■■□□□ 1.49
CPT1AP50416 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPT1AP50416 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
CPT1AP50416 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPT1AP50416 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CPT1AP50416 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPT1AP50416 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPT1AP50416 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CPT1AP50416 AC006970.2-201ENST00000450065 779 ntBASIC24.38■■□□□ 1.49
CPT1AP50416 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.38■■□□□ 1.49
CPT1AP50416 ESRRAP2-201ENST00000418437 1549 ntBASIC24.38■■□□□ 1.49
CPT1AP50416 DUSP8P3-201ENST00000399571 1760 ntBASIC24.38■■□□□ 1.49
CPT1AP50416 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPT1AP50416 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPT1AP50416 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPT1AP50416 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPT1AP50416 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPT1AP50416 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPT1AP50416 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPT1AP50416 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.37■■□□□ 1.49
CPT1AP50416 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CPT1AP50416 SPI1-203ENST00000533030 661 ntTSL 2 BASIC24.37■■□□□ 1.49
CPT1AP50416 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.37■■□□□ 1.49
CPT1AP50416 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.37■■□□□ 1.49
CPT1AP50416 AC011767.1-201ENST00000617410 1153 ntBASIC24.37■■□□□ 1.49
CPT1AP50416 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CPT1AP50416 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
CPT1AP50416 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
CPT1AP50416 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
CPT1AP50416 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CPT1AP50416 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CPT1AP50416 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.36■■□□□ 1.49
CPT1AP50416 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CPT1AP50416 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
CPT1AP50416 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CPT1AP50416 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.36■■□□□ 1.49
CPT1AP50416 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CPT1AP50416 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPT1AP50416 AC009237.3-201ENST00000393279 1427 ntBASIC24.35■■□□□ 1.49
CPT1AP50416 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.35■■□□□ 1.49
CPT1AP50416 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.35■■□□□ 1.49
CPT1AP50416 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPT1AP50416 AC005224.4-201ENST00000583262 1652 ntBASIC24.35■■□□□ 1.49
CPT1AP50416 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPT1AP50416 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.35■■□□□ 1.49
CPT1AP50416 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CPT1AP50416 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPT1AP50416 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.35■■□□□ 1.49
CPT1AP50416 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.35■■□□□ 1.49
CPT1AP50416 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CPT1AP50416 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CPT1AP50416 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPT1AP50416 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CPT1AP50416 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CPT1AP50416 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 CROCCP5-201ENST00000436658 830 ntBASIC24.34■■□□□ 1.49
CPT1AP50416 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.34■■□□□ 1.49
CPT1AP50416 AC104771.1-201ENST00000603335 964 ntBASIC24.34■■□□□ 1.49
CPT1AP50416 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPT1AP50416 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.34■■□□□ 1.49
CPT1AP50416 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CPT1AP50416 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CPT1AP50416 KRT87P-202ENST00000534226 1464 ntBASIC24.33■■□□□ 1.49
CPT1AP50416 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms