Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.78■■□□□ 1.08
RXRGP48443 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRGP48443 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRGP48443 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RXRGP48443 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RXRGP48443 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RXRGP48443 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.78■■□□□ 1.08
RXRGP48443 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.78■■□□□ 1.08
RXRGP48443 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.78■■□□□ 1.08
RXRGP48443 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRGP48443 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRGP48443 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.77■■□□□ 1.08
RXRGP48443 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRGP48443 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRGP48443 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRGP48443 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.77■■□□□ 1.08
RXRGP48443 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.77■■□□□ 1.08
RXRGP48443 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RXRGP48443 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRGP48443 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RXRGP48443 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RXRGP48443 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RXRGP48443 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.77■■□□□ 1.07
RXRGP48443 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RXRGP48443 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RXRGP48443 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
RXRGP48443 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRGP48443 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRGP48443 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRGP48443 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.76■■□□□ 1.07
RXRGP48443 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRGP48443 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RXRGP48443 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRGP48443 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRGP48443 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRGP48443 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRGP48443 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRGP48443 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.75■■□□□ 1.07
RXRGP48443 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRGP48443 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRGP48443 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRGP48443 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRGP48443 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.75■■□□□ 1.07
RXRGP48443 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRGP48443 AC004911.1-201ENST00000416316 871 ntBASIC21.75■■□□□ 1.07
RXRGP48443 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.75■■□□□ 1.07
RXRGP48443 AC105233.4-201ENST00000642045 216 ntBASIC21.75■■□□□ 1.07
RXRGP48443 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRGP48443 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RXRGP48443 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RXRGP48443 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.75■■□□□ 1.07
RXRGP48443 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
RXRGP48443 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RXRGP48443 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
RXRGP48443 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
RXRGP48443 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRGP48443 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRGP48443 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.74■■□□□ 1.07
RXRGP48443 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.74■■□□□ 1.07
RXRGP48443 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RXRGP48443 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RXRGP48443 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RXRGP48443 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RXRGP48443 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RXRGP48443 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.73■■□□□ 1.07
RXRGP48443 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RXRGP48443 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.73■■□□□ 1.07
RXRGP48443 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.73■■□□□ 1.07
RXRGP48443 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.73■■□□□ 1.07
RXRGP48443 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.73■■□□□ 1.07
RXRGP48443 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RXRGP48443 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
RXRGP48443 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RXRGP48443 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RXRGP48443 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RXRGP48443 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RXRGP48443 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.73■■□□□ 1.07
RXRGP48443 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RXRGP48443 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RXRGP48443 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RXRGP48443 AC004812.2-201ENST00000611079 2094 ntBASIC21.72■■□□□ 1.07
RXRGP48443 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RXRGP48443 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.72■■□□□ 1.07
RXRGP48443 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.72■■□□□ 1.07
RXRGP48443 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.72■■□□□ 1.07
RXRGP48443 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RXRGP48443 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.72■■□□□ 1.07
RXRGP48443 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
RXRGP48443 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.72■■□□□ 1.07
RXRGP48443 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RXRGP48443 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RXRGP48443 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RXRGP48443 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RXRGP48443 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.72■■□□□ 1.07
RXRGP48443 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RXRGP48443 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.71■■□□□ 1.07
RXRGP48443 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RXRGP48443 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RXRGP48443 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RXRGP48443 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms