Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC6A12P48065 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A12P48065 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC6A12P48065 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A12P48065 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A12P48065 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A12P48065 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC6A12P48065 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
SLC6A12P48065 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC6A12P48065 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SLC6A12P48065 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A12P48065 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A12P48065 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A12P48065 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC6A12P48065 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A12P48065 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC6A12P48065 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SLC6A12P48065 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SLC6A12P48065 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC6A12P48065 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SLC6A12P48065 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.14■□□□□ 0.97
SLC6A12P48065 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC6A12P48065 AC068587.7-201ENST00000641602 218 ntBASIC21.14■□□□□ 0.97
SLC6A12P48065 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC6A12P48065 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A12P48065 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SLC6A12P48065 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC6A12P48065 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A12P48065 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A12P48065 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SLC6A12P48065 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC6A12P48065 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC6A12P48065 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC6A12P48065 LINC00565-201ENST00000562710 2331 ntBASIC21.12■□□□□ 0.97
SLC6A12P48065 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC6A12P48065 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SLC6A12P48065 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
SLC6A12P48065 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC6A12P48065 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A12P48065 C11orf96-202ENST00000528572 1834 ntBASIC21.11■□□□□ 0.97
SLC6A12P48065 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SLC6A12P48065 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A12P48065 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A12P48065 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A12P48065 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A12P48065 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC6A12P48065 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A12P48065 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC6A12P48065 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC6A12P48065 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A12P48065 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A12P48065 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC6A12P48065 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A12P48065 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SLC6A12P48065 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SLC6A12P48065 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SLC6A12P48065 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A12P48065 UNC93B3-201ENST00000308076 687 ntBASIC21.1■□□□□ 0.97
SLC6A12P48065 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC6A12P48065 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A12P48065 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SLC6A12P48065 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SLC6A12P48065 SLC47A1P1-202ENST00000449666 945 ntBASIC21.1■□□□□ 0.97
SLC6A12P48065 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A12P48065 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.1■□□□□ 0.97
SLC6A12P48065 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A12P48065 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC6A12P48065 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A12P48065 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC6A12P48065 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLC6A12P48065 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SLC6A12P48065 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC6A12P48065 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SLC6A12P48065 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC6A12P48065 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC6A12P48065 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms